RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 FERMT2Q96AC1 680 aa20.45■□□□□ 0.86
AC055811.2-201ENST00000427497 KIAA1683Q9H0B3 1180 aa20.45■□□□□ 0.86
AC055811.2-201ENST00000427497 PRR12Q9ULL5 1215 aa20.45■□□□□ 0.86
AC055811.2-201ENST00000427497 MRVI1Q9Y6F6 885 aa20.45■□□□□ 0.86
AC055811.2-201ENST00000427497 IRF6O14896 467 aa20.44■□□□□ 0.86
AC055811.2-201ENST00000427497 CTAGE5O15320 804 aa20.44■□□□□ 0.86
AC055811.2-201ENST00000427497 CLK2P49760 499 aaKnown RBP20.44■□□□□ 0.86
AC055811.2-201ENST00000427497 IKQ13123 557 aaPredicted RBP20.44■□□□□ 0.86
AC055811.2-201ENST00000427497 PTGDRQ13258 359 aa20.44■□□□□ 0.86
AC055811.2-201ENST00000427497 PPIL2Q13356 520 aa20.44■□□□□ 0.86
AC055811.2-201ENST00000427497 INF2Q27J81 1249 aa20.44■□□□□ 0.86
AC055811.2-201ENST00000427497 SCYL3Q8IZE3 742 aa20.44■□□□□ 0.86
AC055811.2-201ENST00000427497 C4orf32Q8N8J7 132 aa20.44■□□□□ 0.86
AC055811.2-201ENST00000427497 PPATQ06203 517 aa20.43■□□□□ 0.86
AC055811.2-201ENST00000427497 FBXO46Q6PJ61 603 aaPredicted RBP20.43■□□□□ 0.86
AC055811.2-201ENST00000427497 FAM43AQ8N2R8 423 aa20.43■□□□□ 0.86
AC055811.2-201ENST00000427497 CHURC1Q8WUH1 139 aa20.43■□□□□ 0.86
AC055811.2-201ENST00000427497 CUL5Q93034 780 aa20.43■□□□□ 0.86
AC055811.2-201ENST00000427497 AMNQ9BXJ7 453 aa20.43■□□□□ 0.86
AC055811.2-201ENST00000427497 GLT8D2Q9H1C3 349 aa20.43■□□□□ 0.86
AC055811.2-201ENST00000427497 RBSNQ9H1K0 784 aa20.43■□□□□ 0.86
AC055811.2-201ENST00000427497 BIN2Q9UBW5 565 aaPredicted RBP20.43■□□□□ 0.86
AC055811.2-201ENST00000427497 PCDHA1Q9Y5I3 950 aa20.43■□□□□ 0.86
AC055811.2-201ENST00000427497 ZNF202O95125 648 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 CETPP11597 493 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 XRCC6P12956 609 aaKnown RBP eCLIP20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 MCM7P33993 719 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 MRPL12P52815 198 aaKnown RBP20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 MLLT1Q03111 559 aaPredicted RBP20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 SNAPC2Q13487 334 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 ZYXQ15942 572 aaKnown RBP20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 FAM160B2Q86V87 743 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 FBXO11Q86XK2 927 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 LPAR1Q92633 364 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 TIGD1Q96MW7 591 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 FEZ1Q99689 392 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 WDR18Q9BV38 432 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 TMEM260Q9NX78 707 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 PHIPQ8WWQ0 1821 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 TAF1CQ15572 869 aaPredicted RBP20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 JAKMIP3Q5VZ66 844 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 ARL6IP4Q66PJ3 421 aaKnown RBP20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 ERO1AQ96HE7 468 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 CSRNP2Q9H175 543 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 PSTPIP2Q9H939 334 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 FEM1BQ9UK73 627 aa20.42■□□□□ 0.86
AC055811.2-201ENST00000427497 HTTP42858 3142 aa20.41■□□□□ 0.86
AC055811.2-201ENST00000427497 SYKP43405 635 aa20.41■□□□□ 0.86
AC055811.2-201ENST00000427497 SNAP25P60880 206 aa20.41■□□□□ 0.86
AC055811.2-201ENST00000427497 NOL9Q5SY16 702 aaKnown RBP20.41■□□□□ 0.86
AC055811.2-201ENST00000427497 NEK8Q86SG6 692 aa20.41■□□□□ 0.86
AC055811.2-201ENST00000427497 CKAP2LQ8IYA6 745 aa20.41■□□□□ 0.86
AC055811.2-201ENST00000427497 RANBP17Q9H2T7 1088 aaKnown RBP20.41■□□□□ 0.86
AC055811.2-201ENST00000427497 ZFYVE28Q9HCC9 887 aa20.41■□□□□ 0.86
AC055811.2-201ENST00000427497 WDR46O15213 610 aaKnown RBP20.4■□□□□ 0.86
AC055811.2-201ENST00000427497 SP3Q02447 781 aa20.4■□□□□ 0.86
AC055811.2-201ENST00000427497 ORC2Q13416 577 aaPredicted RBP20.4■□□□□ 0.86
AC055811.2-201ENST00000427497 OTOP1Q7RTM1 612 aa20.4■□□□□ 0.86
AC055811.2-201ENST00000427497 CD99L2Q8TCZ2 262 aa20.4■□□□□ 0.86
AC055811.2-201ENST00000427497 TBCKQ8TEA7 893 aa20.4■□□□□ 0.86
AC055811.2-201ENST00000427497 KCNH3Q9ULD8 1083 aa20.4■□□□□ 0.86
AC055811.2-201ENST00000427497 TRIM17Q9Y577 477 aa20.4■□□□□ 0.86
AC055811.2-201ENST00000427497 BTBD19C9JJ37 291 aa20.39■□□□□ 0.86
AC055811.2-201ENST00000427497 CCDC192P0DO97 292 aa20.39■□□□□ 0.86
AC055811.2-201ENST00000427497 PTPRAP18433 802 aa20.39■□□□□ 0.86
AC055811.2-201ENST00000427497 SOX10P56693 466 aa20.39■□□□□ 0.86
AC055811.2-201ENST00000427497 UBE2SQ16763 222 aa20.39■□□□□ 0.86
AC055811.2-201ENST00000427497 SPECC1Q5M775 1068 aa20.39■□□□□ 0.86
AC055811.2-201ENST00000427497 ZCCHC17Q9NP64 241 aaKnown RBP20.39■□□□□ 0.86
AC055811.2-201ENST00000427497 FAM13BQ9NYF5 915 aa20.39■□□□□ 0.86
AC055811.2-201ENST00000427497 LAD1O00515 517 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 EDIL3O43854 480 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 TRAF1Q13077 416 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 IL17AQ16552 155 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 AS3MTQ9HBK9 375 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 PICK1Q9NRD5 415 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 KCNH4Q9UQ05 1017 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 USP14P54578 494 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 TEX2Q8IWB9 1127 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 SDF4Q9BRK5 362 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 FBXO28Q9NVF7 368 aa20.38■□□□□ 0.85
AC055811.2-201ENST00000427497 MEIS2O14770 477 aa20.37■□□□□ 0.85
AC055811.2-201ENST00000427497 PRPHP41219 470 aa20.37■□□□□ 0.85
AC055811.2-201ENST00000427497 TYRO3Q06418 890 aa20.37■□□□□ 0.85
AC055811.2-201ENST00000427497 MTMR2Q13614 643 aa20.37■□□□□ 0.85
AC055811.2-201ENST00000427497 LETM2Q2VYF4 491 aa20.37■□□□□ 0.85
AC055811.2-201ENST00000427497 USP49Q70CQ1 688 aa20.37■□□□□ 0.85
AC055811.2-201ENST00000427497 ZNF280CQ8ND82 737 aa20.37■□□□□ 0.85
AC055811.2-201ENST00000427497 KIFC2Q96AC6 838 aa20.37■□□□□ 0.85
AC055811.2-201ENST00000427497 TMEM60Q9H2L4 133 aa20.37■□□□□ 0.85
AC055811.2-201ENST00000427497 EMILIN3Q9NT22 766 aa20.37■□□□□ 0.85
AC055811.2-201ENST00000427497 CENPFP49454 3210 aa20.36■□□□□ 0.85
AC055811.2-201ENST00000427497 MYH7BA7E2Y1 1941 aa20.36■□□□□ 0.85
AC055811.2-201ENST00000427497 TNRC18O15417 2968 aaPredicted RBP20.36■□□□□ 0.85
AC055811.2-201ENST00000427497 VWA3AA6NCI4 1184 aa20.36■□□□□ 0.85
AC055811.2-201ENST00000427497 OPLAHO14841 1288 aa20.36■□□□□ 0.85
AC055811.2-201ENST00000427497 BACE1P56817 501 aa20.36■□□□□ 0.85
AC055811.2-201ENST00000427497 CAP1Q01518 475 aa20.36■□□□□ 0.85
AC055811.2-201ENST00000427497 SPP2Q13103 211 aa20.36■□□□□ 0.85
AC055811.2-201ENST00000427497 USH1GQ495M9 461 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms