RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 VTI1AQ96AJ9 217 aa11.88□□□□□ -0.51
COMMD1-202ENST00000427417 TRIM43Q96BQ3 446 aaPredicted RBP11.88□□□□□ -0.51
COMMD1-202ENST00000427417 GNEQ9Y223 722 aaKnown RBP11.88□□□□□ -0.51
COMMD1-202ENST00000427417 LRRC37A2A6NM11 1700 aa11.88□□□□□ -0.51
COMMD1-202ENST00000427417 A0A0U1RQG5 324 aaPredicted RBP11.87□□□□□ -0.51
COMMD1-202ENST00000427417 CABYRO75952 493 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 ITGB8P26012 769 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 RPS6P62753 249 aaKnown RBP11.87□□□□□ -0.51
COMMD1-202ENST00000427417 PTH1RQ03431 593 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 SEC23AQ15436 765 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 USH1GQ495M9 461 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 C9orf50Q5SZB4 431 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 SLC30A10Q6XR72 485 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 CENPQQ7L2Z9 268 aaPredicted RBP11.87□□□□□ -0.51
COMMD1-202ENST00000427417 EEPD1Q7L9B9 569 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 MCF2L2Q86YR7 1114 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 ADGRF4Q8IZF3 695 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 MAP4K1Q92918 833 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 SEZ6LQ9BYH1 1024 aa11.87□□□□□ -0.51
COMMD1-202ENST00000427417 E7EWF7 191 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 IFIT3O14879 490 aaKnown RBP11.86□□□□□ -0.51
COMMD1-202ENST00000427417 DYNC1LI2O43237 492 aaPredicted RBP11.86□□□□□ -0.51
COMMD1-202ENST00000427417 RAG1P15918 1043 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 SMPD1P17405 629 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 BEX3Q00994 111 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 PDE4DQ08499 809 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 TRAF1Q13077 416 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 FSCN1Q16658 493 aaKnown RBP11.86□□□□□ -0.51
COMMD1-202ENST00000427417 TMEM63BQ5T3F8 832 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 TAPT1Q6NXT6 567 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 CYB5R4Q7L1T6 521 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 FBXO11Q86XK2 927 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 CPVLQ9H3G5 476 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 TMEM39AQ9NV64 488 aa11.86□□□□□ -0.51
COMMD1-202ENST00000427417 MRPL11Q9Y3B7 192 aaKnown RBP11.86□□□□□ -0.51
COMMD1-202ENST00000427417 KLRF2D3W0D1 207 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 ARVCFO00192 962 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 KIAA0355O15063 1070 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 NKRFO15226 690 aaKnown RBP eCLIP11.85□□□□□ -0.51
COMMD1-202ENST00000427417 TLR3O15455 904 aaKnown RBP11.85□□□□□ -0.51
COMMD1-202ENST00000427417 WTAPQ15007 396 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 SHHQ15465 462 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 QRICH1Q2TAL8 776 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 DUSP28Q4G0W2 176 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 BRDTQ58F21 947 aaPredicted RBP11.85□□□□□ -0.51
COMMD1-202ENST00000427417 DEFB123Q8N688 67 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 AMNQ9BXJ7 453 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 WDR11Q9BZH6 1224 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 JMJD4Q9H9V9 463 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 VAT1LQ9HCJ6 419 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 PDGFCQ9NRA1 345 aa11.85□□□□□ -0.51
COMMD1-202ENST00000427417 RBM8AQ9Y5S9 174 aaKnown RBP11.85□□□□□ -0.51
COMMD1-202ENST00000427417 RBM47A0AV96 593 aaKnown RBP11.84□□□□□ -0.51
COMMD1-202ENST00000427417 PALM3A6NDB9 673 aaPredicted RBP11.84□□□□□ -0.51
COMMD1-202ENST00000427417 CTAGE5O15320 804 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 EDNRBP24530 442 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 CPT1AP50416 773 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 CDK7P50613 346 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 EPHB4P54760 987 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 FAAP100Q0VG06 881 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 TMEM67Q5HYA8 995 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 CATIPQ7Z7H3 387 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 SCFD2Q8WU76 684 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 MTA3Q9BTC8 594 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 MAP3K20Q9NYL2 800 aaKnown RBP11.84□□□□□ -0.51
COMMD1-202ENST00000427417 MAD2L2Q9UI95 211 aa11.84□□□□□ -0.51
COMMD1-202ENST00000427417 ZBTB5O15062 677 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 TIMP1P01033 207 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 GRM4Q14833 912 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 PPP2R5BQ15173 497 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 BMP2KLQ5H9B9 411 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 CASC1Q6TDU7 716 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 CXCL17Q6UXB2 119 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 STAG2Q8N3U4 1231 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 SAMD3Q8N6K7 520 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 OR6J1Q8NGC5 347 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 NSUN6Q8TEA1 469 aaKnown RBP11.83□□□□□ -0.52
COMMD1-202ENST00000427417 FAM161BQ96MY7 647 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 IWS1Q96ST2 819 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
COMMD1-202ENST00000427417 KPNA6O60684 536 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 CFBP00751 764 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 MCM5P33992 734 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 FPGSQ05932 587 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 ITGA7Q13683 1181 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 TTLL4Q14679 1199 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 STXBP2Q15833 593 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 FAM126BQ8IXS8 530 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 MB21D2Q8IYB1 491 aaPredicted RBP11.82□□□□□ -0.52
COMMD1-202ENST00000427417 TMTC2Q8N394 836 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 SLC43A3Q8NBI5 491 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 SYTL5Q8TDW5 730 aaPredicted RBP11.82□□□□□ -0.52
COMMD1-202ENST00000427417 MTMR8Q96EF0 704 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 RMDN3Q96TC7 470 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 ESYT1Q9BSJ8 1104 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 ANO2Q9NQ90 1003 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 GPHNQ9NQX3 736 aaPredicted RBP11.82□□□□□ -0.52
COMMD1-202ENST00000427417 MTMR10Q9NXD2 777 aa11.82□□□□□ -0.52
COMMD1-202ENST00000427417 TBX21Q9UL17 535 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms