RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ZNF214Q9UL59 606 aaPredicted RBP7.71□□□□□ -1.18
LINC00458-202ENST00000427299 A0A087WZG4 1122 aa7.7□□□□□ -1.18
LINC00458-202ENST00000427299 UNCXA6NJT0 531 aa7.7□□□□□ -1.18
LINC00458-202ENST00000427299 ZNF16P17020 682 aaPredicted RBP7.7□□□□□ -1.18
LINC00458-202ENST00000427299 POU4F1Q01851 419 aa7.7□□□□□ -1.18
LINC00458-202ENST00000427299 NT5DC1Q5TFE4 455 aa7.7□□□□□ -1.18
LINC00458-202ENST00000427299 RCSD1Q6JBY9 416 aa7.7□□□□□ -1.18
LINC00458-202ENST00000427299 RUFY4Q6ZNE9 571 aa7.7□□□□□ -1.18
LINC00458-202ENST00000427299 B3GNT8Q7Z7M8 397 aa7.7□□□□□ -1.18
LINC00458-202ENST00000427299 ZDHHC15Q96MV8 337 aa7.7□□□□□ -1.18
LINC00458-202ENST00000427299 PPT2Q9UMR5 302 aa7.7□□□□□ -1.18
LINC00458-202ENST00000427299 FAN1Q9Y2M0 1017 aa7.7□□□□□ -1.18
LINC00458-202ENST00000427299 TMEM87AQ8NBN3 555 aa7.69□□□□□ -1.18
LINC00458-202ENST00000427299 TSPAN17Q96FV3 270 aa7.69□□□□□ -1.18
LINC00458-202ENST00000427299 BCL11AQ9H165 835 aa7.69□□□□□ -1.18
LINC00458-202ENST00000427299 USP40Q9NVE5 1235 aa7.69□□□□□ -1.18
LINC00458-202ENST00000427299 FBLN5Q9UBX5 448 aa7.69□□□□□ -1.18
LINC00458-202ENST00000427299 DBR1Q9UK59 544 aaKnown RBP7.69□□□□□ -1.18
LINC00458-202ENST00000427299 RSF1Q96T23 1441 aaPredicted RBP7.69□□□□□ -1.18
LINC00458-202ENST00000427299 PMLP29590 882 aa7.68□□□□□ -1.18
LINC00458-202ENST00000427299 ZNF76P36508 570 aa7.68□□□□□ -1.18
LINC00458-202ENST00000427299 UBXN11Q5T124 520 aa7.68□□□□□ -1.18
LINC00458-202ENST00000427299 HHIPL2Q6UWX4 724 aa7.68□□□□□ -1.18
LINC00458-202ENST00000427299 USP48Q86UV5 1035 aa7.68□□□□□ -1.18
LINC00458-202ENST00000427299 ALG3Q92685 438 aa7.68□□□□□ -1.18
LINC00458-202ENST00000427299 MCMBPQ9BTE3 642 aa7.68□□□□□ -1.18
LINC00458-202ENST00000427299 DIS3Q9Y2L1 958 aaKnown RBP7.68□□□□□ -1.18
LINC00458-202ENST00000427299 NOBOXO60393 691 aa7.67□□□□□ -1.18
LINC00458-202ENST00000427299 RBM25P49756 843 aaKnown RBP7.67□□□□□ -1.18
LINC00458-202ENST00000427299 TCEAL1Q15170 157 aa7.67□□□□□ -1.18
LINC00458-202ENST00000427299 ZXDCQ2QGD7 858 aaPredicted RBP7.67□□□□□ -1.18
LINC00458-202ENST00000427299 ZNF394Q53GI3 561 aa7.67□□□□□ -1.18
LINC00458-202ENST00000427299 FBXW10Q5XX13 1052 aa7.67□□□□□ -1.18
LINC00458-202ENST00000427299 EEF1DP3Q658K8 133 aa7.67□□□□□ -1.18
LINC00458-202ENST00000427299 LTBP3Q9NS15 1303 aa7.67□□□□□ -1.18
LINC00458-202ENST00000427299 K7ESM1 405 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 AURKAO14965 403 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 FANCCQ00597 558 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 PPP2R5DQ14738 602 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 FERMT3Q86UX7 667 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 CARFQ8N187 725 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 HAUS7Q99871 368 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 BCAS3Q9H6U6 928 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 RXFP1Q9HBX9 757 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 WHRNQ9P202 907 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 PCDHGB7Q9Y5F8 929 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 DUSP10Q9Y6W6 482 aa7.66□□□□□ -1.18
LINC00458-202ENST00000427299 EIF4G1Q04637 1599 aaKnown RBP7.65□□□□□ -1.18
LINC00458-202ENST00000427299 CPA5Q8WXQ8 436 aa7.65□□□□□ -1.18
LINC00458-202ENST00000427299 RNF34Q969K3 372 aa7.65□□□□□ -1.18
LINC00458-202ENST00000427299 KLHL25Q9H0H3 589 aa7.65□□□□□ -1.18
LINC00458-202ENST00000427299 KIAA1522Q9P206 1035 aaPredicted RBP7.65□□□□□ -1.18
LINC00458-202ENST00000427299 CABP7Q86V35 215 aa7.64□□□□□ -1.19
LINC00458-202ENST00000427299 LZTR1Q8N653 840 aa7.64□□□□□ -1.19
LINC00458-202ENST00000427299 NETO2Q8NC67 525 aa7.64□□□□□ -1.19
LINC00458-202ENST00000427299 ADCY4Q8NFM4 1077 aa7.64□□□□□ -1.19
LINC00458-202ENST00000427299 NOX5Q96PH1 765 aa7.64□□□□□ -1.19
LINC00458-202ENST00000427299 MTA3Q9BTC8 594 aa7.64□□□□□ -1.19
LINC00458-202ENST00000427299 LNPKQ9C0E8 428 aa7.64□□□□□ -1.19
LINC00458-202ENST00000427299 METTL5Q9NRN9 209 aaKnown RBP7.64□□□□□ -1.19
LINC00458-202ENST00000427299 RWDD3Q9Y3V2 267 aa7.64□□□□□ -1.19
LINC00458-202ENST00000427299 UNC13AQ9UPW8 1703 aa7.64□□□□□ -1.19
LINC00458-202ENST00000427299 STXBP3O00186 592 aa7.63□□□□□ -1.19
LINC00458-202ENST00000427299 PPP1R11O60927 126 aaPredicted RBP7.63□□□□□ -1.19
LINC00458-202ENST00000427299 INSRRP14616 1297 aa7.63□□□□□ -1.19
LINC00458-202ENST00000427299 SLC9A5Q14940 896 aa7.63□□□□□ -1.19
LINC00458-202ENST00000427299 SMARCC2Q8TAQ2 1214 aa7.63□□□□□ -1.19
LINC00458-202ENST00000427299 PEX11GQ96HA9 241 aa7.63□□□□□ -1.19
LINC00458-202ENST00000427299 BACH2Q9BYV9 841 aa7.63□□□□□ -1.19
LINC00458-202ENST00000427299 TMPRSS5Q9H3S3 457 aa7.63□□□□□ -1.19
LINC00458-202ENST00000427299 VAMP1P23763 118 aa7.62□□□□□ -1.19
LINC00458-202ENST00000427299 CNR2P34972 360 aa7.62□□□□□ -1.19
LINC00458-202ENST00000427299 GJA9P57773 515 aa7.62□□□□□ -1.19
LINC00458-202ENST00000427299 SPATA6Q9NWH7 488 aaPredicted RBP7.62□□□□□ -1.19
LINC00458-202ENST00000427299 NUDT5Q9UKK9 219 aa7.62□□□□□ -1.19
LINC00458-202ENST00000427299 MYRFQ9Y2G1 1151 aa7.62□□□□□ -1.19
LINC00458-202ENST00000427299 E9PSI1 815 aa7.61□□□□□ -1.19
LINC00458-202ENST00000427299 RACK1P63244 317 aaKnown RBP7.61□□□□□ -1.19
LINC00458-202ENST00000427299 CACNB2Q08289 660 aaPredicted RBP7.61□□□□□ -1.19
LINC00458-202ENST00000427299 ZNF827Q17R98 1081 aa7.61□□□□□ -1.19
LINC00458-202ENST00000427299 CCDC81Q6ZN84 652 aa7.61□□□□□ -1.19
LINC00458-202ENST00000427299 ZNF761Q86XN6 746 aaPredicted RBP7.61□□□□□ -1.19
LINC00458-202ENST00000427299 DDX1Q92499 740 aaKnown RBP7.61□□□□□ -1.19
LINC00458-202ENST00000427299 GBP3Q9H0R5 595 aa7.61□□□□□ -1.19
LINC00458-202ENST00000427299 PHAXQ9H814 394 aaKnown RBP7.61□□□□□ -1.19
LINC00458-202ENST00000427299 IGSF5Q9NSI5 407 aa7.61□□□□□ -1.19
LINC00458-202ENST00000427299 CGGBP1Q9UFW8 167 aaPredicted RBP7.61□□□□□ -1.19
LINC00458-202ENST00000427299 BACE2Q9Y5Z0 518 aa7.61□□□□□ -1.19
LINC00458-202ENST00000427299 VAMP4O75379 141 aa7.6□□□□□ -1.19
LINC00458-202ENST00000427299 ITGB3P05106 788 aa7.6□□□□□ -1.19
LINC00458-202ENST00000427299 EPHX1P07099 455 aa7.6□□□□□ -1.19
LINC00458-202ENST00000427299 MAGEA10P43363 369 aaPredicted RBP7.6□□□□□ -1.19
LINC00458-202ENST00000427299 SEPHS1P49903 392 aa7.6□□□□□ -1.19
LINC00458-202ENST00000427299 PUM1Q14671 1186 aaKnown RBP eCLIP7.6□□□□□ -1.19
LINC00458-202ENST00000427299 GNPTABQ3T906 1256 aa7.6□□□□□ -1.19
LINC00458-202ENST00000427299 HEATR6Q6AI08 1181 aaKnown RBP7.6□□□□□ -1.19
LINC00458-202ENST00000427299 MRRFQ96E11 262 aaKnown RBP7.6□□□□□ -1.19
LINC00458-202ENST00000427299 RBM15Q96T37 977 aaKnown RBP eCLIP7.6□□□□□ -1.19
LINC00458-202ENST00000427299 NTMQ9P121 344 aa7.6□□□□□ -1.19
LINC00458-202ENST00000427299 GULP1Q9UBP9 304 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms