RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MAP3K10Q02779 954 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 SKA2Q8WVK7 121 aaPredicted RBP15.68■□□□□ 0.1
PTPN13-203ENST00000427191 CDC23Q9UJX2 597 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 MRPL11Q9Y3B7 192 aaKnown RBP15.68■□□□□ 0.1
PTPN13-203ENST00000427191 MYO1FO00160 1098 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 PGRMC1O00264 195 aaKnown RBP15.68■□□□□ 0.1
PTPN13-203ENST00000427191 EEF1B2P24534 225 aaKnown RBP15.68■□□□□ 0.1
PTPN13-203ENST00000427191 ITGA6P23229 1130 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 LIG3P49916 1009 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 KIF2CQ99661 725 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 ZNF212Q9UDV6 495 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 EPN1Q9Y6I3 576 aaPredicted RBP15.68■□□□□ 0.1
PTPN13-203ENST00000427191 NOP14P78316 857 aaKnown RBP15.68■□□□□ 0.1
PTPN13-203ENST00000427191 MED23Q9ULK4 1368 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 UFL1O94874 794 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 ABCB4P21439 1286 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 ITKQ08881 620 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 DYNC1I2Q13409 638 aaKnown RBP15.68■□□□□ 0.1
PTPN13-203ENST00000427191 TRAPPC3LQ5T215 181 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 LRRC43Q8N309 656 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 FAM160B1Q5W0V3 765 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 NDE1Q9NXR1 346 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 COPG1Q9Y678 874 aaKnown RBP15.67■□□□□ 0.1
PTPN13-203ENST00000427191 NVLO15381 856 aaKnown RBP15.67■□□□□ 0.1
PTPN13-203ENST00000427191 PIK3CAP42336 1068 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 XAGE2Q96GT9 111 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 DIS3Q9Y2L1 958 aaKnown RBP15.67■□□□□ 0.1
PTPN13-203ENST00000427191 BIVM-ERCC5R4GMW8 1640 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 MTBPQ96DY7 904 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 SATB2Q9UPW6 733 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 hCG_1984214I3L0E3 225 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 MAPK13O15264 365 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 TMEM191BP0C7N4 346 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 TPH2Q8IWU9 490 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 CCDC151A5D8V7 595 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 K7ENM7 598 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 ADCY2Q08462 1091 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 DHTKD1Q96HY7 919 aaPredicted RBP15.67■□□□□ 0.1
PTPN13-203ENST00000427191 TRIM45Q9H8W5 580 aaPredicted RBP15.67■□□□□ 0.1
PTPN13-203ENST00000427191 RRP15Q9Y3B9 282 aaKnown RBP15.67■□□□□ 0.1
PTPN13-203ENST00000427191 ABCC12Q96J65 1359 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 EIF6P56537 245 aaKnown RBP15.67■□□□□ 0.1
PTPN13-203ENST00000427191 EIF4A2Q14240 407 aaKnown RBP15.67■□□□□ 0.1
PTPN13-203ENST00000427191 FAM186BQ8IYM0 893 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 TLK1Q9UKI8 766 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 ZNF518AQ6AHZ1 1483 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 PLB1Q6P1J6 1458 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 SGK1O00141 431 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 OR52Z1P0C646 297 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 IDI1Q13907 227 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 MORC4Q8TE76 937 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 ATP10DQ9P241 1426 aa15.67■□□□□ 0.1
PTPN13-203ENST00000427191 IQANK1A0A1B0GTG1 560 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 HDAC4P56524 1084 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 TRIM33Q9UPN9 1127 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 NPC1L1Q9UHC9 1359 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 ECEL1O95672 775 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 GUCY2DQ02846 1103 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 IFT88Q13099 833 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 MYSM1Q5VVJ2 828 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 NEK8Q86SG6 692 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 BLIDQ8IZY5 108 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 NLRC4Q9NPP4 1024 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 SUCLA2Q9P2R7 463 aaPredicted RBP15.66■□□□□ 0.1
PTPN13-203ENST00000427191 PCDHA12Q9UN75 941 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 KRT8P05787 483 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 EXOC3L4Q17RC7 722 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 DYMQ7RTS9 669 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 TRAIPQ9BWF2 469 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 YY1AP1Q9H869 796 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 SAP30BPQ9UHR5 308 aaKnown RBP15.66■□□□□ 0.1
PTPN13-203ENST00000427191 ADKP55263 362 aaKnown RBP15.66■□□□□ 0.1
PTPN13-203ENST00000427191 PNOCQ13519 176 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 FGD4Q96M96 766 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 GSDMAQ96QA5 445 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 MCF2P10911 925 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 DDX5P17844 614 aaKnown RBP15.66■□□□□ 0.1
PTPN13-203ENST00000427191 CWF19L2Q2TBE0 894 aaKnown RBP15.66■□□□□ 0.1
PTPN13-203ENST00000427191 GRAMD4Q6IC98 578 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 SPATA5Q8NB90 893 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 TBC1D7Q9P0N9 293 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 SYCP2Q9BX26 1530 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 FOSP01100 380 aaPredicted RBP15.66■□□□□ 0.1
PTPN13-203ENST00000427191 KRT4P19013 534 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 CASP2P42575 452 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 ARHGEF16Q5VV41 709 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 C6orf118Q5T5N4 469 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 GLG1Q92896 1179 aa15.66■□□□□ 0.1
PTPN13-203ENST00000427191 PPP1R12AO14974 1030 aaPredicted RBP15.65■□□□□ 0.1
PTPN13-203ENST00000427191 XPAP23025 273 aaPredicted RBP15.65■□□□□ 0.1
PTPN13-203ENST00000427191 PCYT1AP49585 367 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 ALCAMQ13740 583 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 CDC37Q16543 378 aaPredicted RBP15.65■□□□□ 0.1
PTPN13-203ENST00000427191 CYP2J2P51589 502 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 RCN2Q14257 317 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 CACTINQ8WUQ7 758 aaKnown RBP15.65■□□□□ 0.1
PTPN13-203ENST00000427191 ATP6V1E2Q96A05 226 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 KLHL29Q96CT2 875 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 ARMT1Q9H993 441 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 PDE11AQ9HCR9 933 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms