RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 CAPN12Q6ZSI9 719 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 TRMT2AQ8IZ69 625 aaKnown RBP8.7□□□□□ -1.02
CTNND1-207ENST00000426142 NUCKS1Q9H1E3 243 aaKnown RBP8.7□□□□□ -1.02
CTNND1-207ENST00000426142 PCIF1Q9H4Z3 704 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 LARSQ9P2J5 1176 aaKnown RBP8.7□□□□□ -1.02
CTNND1-207ENST00000426142 ITKQ08881 620 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 KSR1Q8IVT5 923 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 KANSL2Q9H9L4 492 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 RAB20Q9NX57 234 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 ADGRL3Q9HAR2 1447 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 CDC42BPGQ6DT37 1551 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 NPR1P16066 1061 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 USP14P54578 494 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 SYDE2Q5VT97 1194 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 KAZNQ674X7 775 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 MGARPQ8TDB4 240 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 LARP4BQ92615 738 aaKnown RBP8.7□□□□□ -1.02
CTNND1-207ENST00000426142 DISC1Q9NRI5 854 aa8.7□□□□□ -1.02
CTNND1-207ENST00000426142 GOLGA6CA6NDK9 693 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 CLIC2O15247 247 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 FOSP01100 380 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 ZNF853P0CG23 659 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 GOLGA6DP0CG33 693 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 KRT15P19012 456 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 SUPT20HL1Q3ZLR7 823 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 SND1Q7KZF4 910 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 TRIM50Q86XT4 487 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 SH3RF3Q8TEJ3 882 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 CNOT6LQ96LI5 555 aaKnown RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 GOLGA6AQ9NYA3 693 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 SH2B2O14492 632 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 TUBBP07437 444 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 MCAMP43121 646 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 MYL7Q01449 175 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 FYB2Q5VWT5 728 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 CEP128Q6ZU80 1094 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 GOLGA5Q8TBA6 731 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 AIFM3Q96NN9 605 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 CCDC94Q9BW85 323 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 RNF26Q9BY78 433 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 BSDC1Q9NW68 430 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 CD2APQ9Y5K6 639 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 LACTBP83111 547 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 TMC4Q7Z404 712 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 VPS52Q8N1B4 723 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 FOXP1Q9H334 677 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 RRAGDQ9NQL2 400 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 PARP2Q9UGN5 583 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 FAM184BQ9ULE4 1060 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 SPATA31A3Q5VYP0 1347 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 GOLGA6BA6NDN3 693 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 INO80B-WBP1J3KQ70 363 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 CYP2D6P10635 497 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 CDK8P49336 464 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 HHATQ5VTY9 493 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 SIRT2Q8IXJ6 389 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 ANKRD13CQ8N6S4 541 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 INO80BQ9C086 356 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 ATG3Q9NT62 314 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.69□□□□□ -1.025e-6■■■□□ 17.3
CTNND1-207ENST00000426142 PI4KBQ9UBF8 816 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 CDK12Q9NYV4 1490 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-207ENST00000426142 AFF2P51816 1311 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 LARGE1O95461 756 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 TUBB2AQ13885 445 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 EPHA10Q5JZY3 1008 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 CIAPIN1Q6FI81 312 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 ZBTB33Q86T24 672 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 CTAGE3PQ8IX95 158 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 TTLL6Q8N841 843 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 TUBB2BQ9BVA1 445 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 NBPF3Q9H094 633 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 SAR1BQ9Y6B6 198 aa8.69□□□□□ -1.02
CTNND1-207ENST00000426142 KRIT1O00522 736 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 CCND2P30279 289 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 OSTNP61366 133 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 CCNA1P78396 465 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 SPATA1Q5VX52 437 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 TBC1D9BQ66K14 1250 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 ARMC9Q7Z3E5 817 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 TSKSQ9UJT2 592 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 ABCC3O15438 1527 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 PAK2Q13177 524 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 NKX1-1Q15270 411 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-207ENST00000426142 CDC37Q16543 378 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-207ENST00000426142 MIS18BP1Q6P0N0 1132 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 PI4K2BQ8TCG2 481 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 MASTLQ96GX5 879 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 RPS6KC1Q96S38 1066 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 ZNF341Q9BYN7 854 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 OGFRQ9NZT2 677 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 HESX1Q9UBX0 185 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 DDX41Q9UJV9 622 aaKnown RBP8.68□□□□□ -1.02
CTNND1-207ENST00000426142 ABT1Q9ULW3 272 aaKnown RBP8.68□□□□□ -1.02
CTNND1-207ENST00000426142 N4BP1O75113 896 aaKnown RBP8.68□□□□□ -1.02
CTNND1-207ENST00000426142 NR2F2P24468 414 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 MARK3P27448 753 aa8.68□□□□□ -1.02
CTNND1-207ENST00000426142 EXOC3L4Q17RC7 722 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms