RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 SCUBE1Q8IWY4 988 aa5.85□□□□□ -1.47
HDAC9-209ENST00000425071 ZBTB38Q8NAP3 1195 aaPredicted RBP5.85□□□□□ -1.47
HDAC9-209ENST00000425071 NUP43Q8NFH3 380 aa5.85□□□□□ -1.47
HDAC9-209ENST00000425071 FRS2Q8WU20 508 aa5.85□□□□□ -1.47
HDAC9-209ENST00000425071 IPO9Q96P70 1041 aaKnown RBP5.85□□□□□ -1.47
HDAC9-209ENST00000425071 PLCD4Q9BRC7 762 aa5.85□□□□□ -1.47
HDAC9-209ENST00000425071 IMPACTQ9P2X3 320 aa5.85□□□□□ -1.47
HDAC9-209ENST00000425071 UNC13AQ9UPW8 1703 aa5.85□□□□□ -1.47
HDAC9-209ENST00000425071 CCDC163A0A0D9SF12 145 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 A0A1W2PQJ5 194 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 C7orf72A4D263 438 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 OR14I1A6ND48 311 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 LRRC10BA6NIK2 292 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.84□□□□□ -1.47
HDAC9-209ENST00000425071 PEX10O60683 326 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 MPOP05164 745 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 ECI1P42126 302 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 MVKQ03426 396 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 NR1I3Q14994 352 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 SLC35F1Q5T1Q4 408 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 SPATC1Q76KD6 591 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 JMYQ8N9B5 988 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 KREMEN2Q8NCW0 462 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 DIO2Q92813 273 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 LIN37Q96GY3 246 aaPredicted RBP5.84□□□□□ -1.47
HDAC9-209ENST00000425071 MRFAP1L1Q96HT8 127 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 SLC26A8Q96RN1 970 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 KRTAP4-12Q9BQ66 201 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 IER2Q9BTL4 223 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 LGR4Q9BXB1 951 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 GPRC5CQ9NQ84 441 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 ARHGEF4Q9NR80 690 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.84□□□□□ -1.47
HDAC9-209ENST00000425071 CLEC1BQ9P126 229 aa5.84□□□□□ -1.47
HDAC9-209ENST00000425071 CDK11AQ9UQ88 783 aaPredicted RBP5.84□□□□□ -1.47
HDAC9-209ENST00000425071 KDM2BQ8NHM5 1336 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 FAM221BA6H8Z2 402 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 SRGAP3O43295 1099 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 MYO1BO43795 1136 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 FARP2O94887 1054 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-209ENST00000425071 PABPC1P11940 636 aaKnown RBP5.83□□□□□ -1.48
HDAC9-209ENST00000425071 PDE6BP35913 854 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 LTBRP36941 435 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 CYP4F3Q08477 520 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 NSMFQ6X4W1 530 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 CABP7Q86V35 215 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 TMEM145Q8NBT3 493 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 BHLHE22Q8NFJ8 381 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-209ENST00000425071 C1orf159Q96HA4 380 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 LNPKQ9C0E8 428 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 EPB41L4BQ9H329 900 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 ZNF552Q9H707 407 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-209ENST00000425071 TNFRSF12AQ9NP84 129 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 NPFFR2Q9Y5X5 522 aa5.83□□□□□ -1.48
HDAC9-209ENST00000425071 ADCY3O60266 1144 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 DLX3O60479 287 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 GRIA2P42262 883 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 CBX2Q14781 532 aaPredicted RBP5.82□□□□□ -1.48
HDAC9-209ENST00000425071 MLANAQ16655 118 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 ADGRF1Q5T601 910 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 CPNE8Q86YQ8 564 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 KRTAP1-3Q8IUG1 177 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 PPIL6Q8IXY8 311 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 LZTR1Q8N653 840 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 POU5F2Q8N7G0 328 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 FBXO15Q8NCQ5 510 aaPredicted RBP5.82□□□□□ -1.48
HDAC9-209ENST00000425071 THAP3Q8WTV1 239 aaPredicted RBP5.82□□□□□ -1.48
HDAC9-209ENST00000425071 DCAF4Q8WV16 495 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 FAM84AQ96KN4 292 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 DNAJC7Q99615 494 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 CDC6Q99741 560 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 ZFYVE21Q9BQ24 234 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 ZSWIM4Q9H7M6 989 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 DCP1AQ9NPI6 582 aaPredicted RBP5.82□□□□□ -1.48
HDAC9-209ENST00000425071 GPR27Q9NS67 375 aa5.82□□□□□ -1.48
HDAC9-209ENST00000425071 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.82□□□□□ -1.48
HDAC9-209ENST00000425071 TIMM13Q9Y5L4 95 aaPredicted RBP5.82□□□□□ -1.48
HDAC9-209ENST00000425071 PRODHO43272 600 aa5.81□□□□□ -1.48
HDAC9-209ENST00000425071 EFEMP2O95967 443 aa5.81□□□□□ -1.48
HDAC9-209ENST00000425071 CYBBP04839 570 aa5.81□□□□□ -1.48
HDAC9-209ENST00000425071 RPL11P62913 178 aaKnown RBP5.81□□□□□ -1.48
HDAC9-209ENST00000425071 SUMO1P63165 101 aaKnown RBP5.81□□□□□ -1.48
HDAC9-209ENST00000425071 YBX1P67809 324 aaKnown RBP5.81□□□□□ -1.48
HDAC9-209ENST00000425071 SF1Q15637 639 aaKnown RBP5.81□□□□□ -1.48
HDAC9-209ENST00000425071 CCDC144BQ3MJ40 725 aa5.81□□□□□ -1.48
HDAC9-209ENST00000425071 PAQR3Q6TCH7 311 aa5.81□□□□□ -1.48
HDAC9-209ENST00000425071 SIRT2Q8IXJ6 389 aa5.81□□□□□ -1.48
HDAC9-209ENST00000425071 NETO2Q8NC67 525 aa5.81□□□□□ -1.48
HDAC9-209ENST00000425071 OSBP2Q969R2 916 aa5.81□□□□□ -1.48
HDAC9-209ENST00000425071 NSUN3Q9H649 340 aaKnown RBP5.81□□□□□ -1.48
HDAC9-209ENST00000425071 PFDN2Q9UHV9 154 aa5.81□□□□□ -1.48
HDAC9-209ENST00000425071 TRBV23-1A0A0A0MS06 115 aa5.8□□□□□ -1.48
HDAC9-209ENST00000425071 DIAPH1O60610 1272 aaKnown RBP5.8□□□□□ -1.48
HDAC9-209ENST00000425071 SEMA7AO75326 666 aa5.8□□□□□ -1.48
HDAC9-209ENST00000425071 BMS1Q14692 1282 aaKnown RBP5.8□□□□□ -1.48
HDAC9-209ENST00000425071 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
HDAC9-209ENST00000425071 PRR23BQ6ZRT6 265 aa5.8□□□□□ -1.48
HDAC9-209ENST00000425071 Q8N1Y9 231 aa5.8□□□□□ -1.48
HDAC9-209ENST00000425071 ZSWIM2Q8NEG5 633 aa5.8□□□□□ -1.48
HDAC9-209ENST00000425071 USP33Q8TEY7 942 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms