RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 MEFVO15553 781 aaPredicted RBP14.37□□□□□ -0.11
TOP2B-203ENST00000424225 SLC1A4P43007 532 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 CCDC13Q8IYE1 715 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 WASF1Q92558 559 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 KRT23Q9C075 422 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 STIM2Q9P246 746 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 MCM8Q9UJA3 840 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 PNPLA7Q6ZV29 1317 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 IRS4O14654 1257 aaPredicted RBP14.37□□□□□ -0.11
TOP2B-203ENST00000424225 MNAT1P51948 309 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 PTGISQ16647 500 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 EMC10Q5UCC4 262 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 KIAA1328Q86T90 577 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 DDX42Q86XP3 938 aaKnown RBP eCLIP14.37□□□□□ -0.11
TOP2B-203ENST00000424225 MYCBPAPQ8TBZ2 947 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 MMTAG2Q9BU76 263 aaKnown RBP14.37□□□□□ -0.11
TOP2B-203ENST00000424225 FGFBP2Q9BYJ0 223 aa14.37□□□□□ -0.11
TOP2B-203ENST00000424225 PES1O00541 588 aaKnown RBP14.36□□□□□ -0.11
TOP2B-203ENST00000424225 TMOD1P28289 359 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 TUBB4BP68371 445 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 KCNMA1Q12791 1236 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 CPVLQ9H3G5 476 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 DDX20Q9UHI6 824 aaKnown RBP14.36□□□□□ -0.11
TOP2B-203ENST00000424225 CEP131Q9UPN4 1083 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 MYH4Q9Y623 1939 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 ANO9A1A5B4 782 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 NOL4O94818 638 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 DDR1Q08345 913 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 PTPROQ16827 1216 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 CNOT6LQ96LI5 555 aaKnown RBP14.36□□□□□ -0.11
TOP2B-203ENST00000424225 CCT8L2Q96SF2 557 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 SUFUQ9UMX1 484 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 CYTH3O43739 400 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 RHOBTB3O94955 611 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 TRIM14Q14142 442 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 GIGYF2Q6Y7W6 1299 aaKnown RBP14.36□□□□□ -0.11
TOP2B-203ENST00000424225 PAGR1Q9BTK6 254 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 EXOC1Q9NV70 894 aa14.36□□□□□ -0.11
TOP2B-203ENST00000424225 LRRC53A6NM62 1247 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 HSPA2P54652 639 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 KDM7AQ6ZMT4 941 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 CAGE1Q8TC20 777 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 PIGBQ92521 554 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 DEF6Q9H4E7 631 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 FAM207AQ9NSI2 230 aaPredicted RBP14.35□□□□□ -0.11
TOP2B-203ENST00000424225 PLAGL2Q9UPG8 496 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 NDUFAB1O14561 156 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 HNRNPH3P31942 346 aaKnown RBP14.35□□□□□ -0.11
TOP2B-203ENST00000424225 DNA2P51530 1060 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 KIF11P52732 1056 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 C2CD5Q86YS7 1000 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 EPN3Q9H201 632 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 THAP9Q9H5L6 903 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 CNNM2Q9H8M5 875 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 RREB1Q92766 1687 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 TUBBP07437 444 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 MYBP10242 640 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 KLRK1P26718 216 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 ZBED6P86452 979 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 SLC12A6Q9UHW9 1150 aa14.35□□□□□ -0.11
TOP2B-203ENST00000424225 RASSF7Q02833 373 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 NKX1-1Q15270 411 aaPredicted RBP14.34□□□□□ -0.11
TOP2B-203ENST00000424225 C3orf67Q6ZVT6 689 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 AMOTL1Q8IY63 956 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 EPB41L5Q9HCM4 733 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 IL17RBQ9NRM6 502 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 ANAPC4Q9UJX5 808 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 BHMG1C9JSJ3 638 aaPredicted RBP14.34□□□□□ -0.11
TOP2B-203ENST00000424225 KRT86O43790 486 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 FGRP09769 529 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 TRIM21P19474 475 aaKnown RBP14.34□□□□□ -0.11
TOP2B-203ENST00000424225 TBC1D8BQ0IIM8 1120 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 CCDC96Q2M329 555 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 FAXDC2Q96IV6 333 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 PHLPP1O60346 1717 aa14.34□□□□□ -0.11
TOP2B-203ENST00000424225 GOLGA8KD6RF30 607 aa14.33□□□□□ -0.11
TOP2B-203ENST00000424225 FTCDO95954 541 aa14.33□□□□□ -0.11
TOP2B-203ENST00000424225 ERVK-9P63128 1117 aa14.33□□□□□ -0.11
TOP2B-203ENST00000424225 PUM3Q15397 648 aaKnown RBP14.33□□□□□ -0.11
TOP2B-203ENST00000424225 VCPKMTQ9H867 229 aa14.33□□□□□ -0.11
TOP2B-203ENST00000424225 SLC40A1Q9NP59 571 aa14.33□□□□□ -0.11
TOP2B-203ENST00000424225 NUTM2BA6NNL0 878 aaPredicted RBP14.33□□□□□ -0.12
TOP2B-203ENST00000424225 NUTM2EB1AL46 878 aaPredicted RBP14.33□□□□□ -0.12
TOP2B-203ENST00000424225 EEF1GP26641 437 aaKnown RBP14.33□□□□□ -0.12
TOP2B-203ENST00000424225 TNFRSF8P28908 595 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 MAP2K2P36507 400 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 GUCY2DQ02846 1103 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 SF3A3Q12874 501 aaKnown RBP eCLIP14.33□□□□□ -0.12
TOP2B-203ENST00000424225 IFT88Q13099 833 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 ACCSLQ4AC99 568 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 NLRP14Q86W24 1093 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 CSGALNACT2Q8N6G5 542 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 TRIM47Q96LD4 638 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 IFIH1Q9BYX4 1025 aaKnown RBP14.33□□□□□ -0.12
TOP2B-203ENST00000424225 ANKRD18BA2A2Z9 1011 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 F8W031 263 aaPredicted RBP14.33□□□□□ -0.12
TOP2B-203ENST00000424225 RAD51CO43502 376 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 ERGIC2Q96RQ1 377 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 PCDHA6Q9UN73 950 aa14.33□□□□□ -0.12
TOP2B-203ENST00000424225 ZBTB1Q9Y2K1 713 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms