RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SYN2Q92777 582 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-204ENST00000424143 ALS2CR12Q96Q35 445 aa16.95■□□□□ 0.3
C9orf3-204ENST00000424143 NOC4LQ9BVI4 516 aaKnown RBP16.95■□□□□ 0.3
C9orf3-204ENST00000424143 ZMYND12Q9H0C1 365 aa16.95■□□□□ 0.3
C9orf3-204ENST00000424143 TMEM60Q9H2L4 133 aa16.95■□□□□ 0.3
C9orf3-204ENST00000424143 SIK3Q9Y2K2 1263 aa16.95■□□□□ 0.3
C9orf3-204ENST00000424143 PCDHA13Q9Y5I0 950 aa16.95■□□□□ 0.3
C9orf3-204ENST00000424143 GOLGA6CA6NDK9 693 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 SMIM22K7EJ46 135 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 GOLGA6DP0CG33 693 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 MTIF2P46199 727 aaKnown RBP16.94■□□□□ 0.3
C9orf3-204ENST00000424143 SPTY2D1Q68D10 685 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-204ENST00000424143 ANKRD40Q6AI12 368 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 FOXR1Q6PIV2 292 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 EIF1ADQ8N9N8 165 aaKnown RBP16.94■□□□□ 0.3
C9orf3-204ENST00000424143 IPO4Q8TEX9 1081 aaKnown RBP16.94■□□□□ 0.3
C9orf3-204ENST00000424143 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.94■□□□□ 0.35e-7■■■■■ 76.4
C9orf3-204ENST00000424143 SPZ1Q9BXG8 430 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 GOLGA6AQ9NYA3 693 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 STK17AQ9UEE5 414 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 MINPP1Q9UNW1 487 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 MAPK8IP1Q9UQF2 711 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 CASZ1Q86V15 1759 aa16.94■□□□□ 0.3
C9orf3-204ENST00000424143 PALM3A6NDB9 673 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-204ENST00000424143 TSPY2A6NKD2 308 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 RBAK-RBAKDNI3L0D1 243 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 STXBP3O00186 592 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 SRGAP2O75044 1071 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 PHACTR2O75167 634 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 OR52Z1P0C646 297 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 CRKLP46109 303 aaKnown RBP16.93■□□□□ 0.3
C9orf3-204ENST00000424143 IRAK1P51617 712 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 MECOMQ03112 1051 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 PDE4DQ08499 809 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 MAN2A1Q16706 1144 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 VWA3BQ502W6 1294 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 SUGP1Q8IWZ8 645 aaKnown RBP16.93■□□□□ 0.3
C9orf3-204ENST00000424143 GUF1Q8N442 669 aaKnown RBP16.93■□□□□ 0.3
C9orf3-204ENST00000424143 SPATA4Q8NEY3 305 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 LRRC27Q9C0I9 530 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 MAD2L2Q9UI95 211 aa16.93■□□□□ 0.3
C9orf3-204ENST00000424143 NIP7Q9Y221 180 aaKnown RBP eCLIP16.93■□□□□ 0.3
C9orf3-204ENST00000424143 ESYT2A0FGR8 921 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 ZNF263O14978 683 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 ZEB2O60315 1214 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 VEGFAP15692 232 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-204ENST00000424143 LRRC63Q05C16 580 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 PSMD2Q13200 908 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 C12orf60Q5U649 245 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 CERS3Q8IU89 383 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 MREGQ8N565 214 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 PNMA1Q8ND90 353 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 ANKRD2Q9GZV1 360 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 JADE2Q9NQC1 790 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 DOT1LQ8TEK3 1739 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 hCG_1984214I3L0E3 225 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 ADAMTS3O15072 1205 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 PLCG1P19174 1290 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 ASTE1Q2TB18 679 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-204ENST00000424143 UNC13DQ70J99 1090 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 CD302Q8IX05 232 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 PROM2Q8N271 834 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 ZNF713Q8N859 430 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-204ENST00000424143 RASSF8Q8NHQ8 419 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 CAPZA3Q96KX2 299 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 OSBPL9Q96SU4 736 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 PAGR1Q9BTK6 254 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 IFIH1Q9BYX4 1025 aaKnown RBP16.92■□□□□ 0.3
C9orf3-204ENST00000424143 YY1AP1Q9H869 796 aa16.92■□□□□ 0.3
C9orf3-204ENST00000424143 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 GRID2IPA4D2P6 1211 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 EIF3HO15372 352 aaKnown RBP eCLIP16.91■□□□□ 0.3
C9orf3-204ENST00000424143 SLC26A4O43511 780 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 MYBL2P10244 700 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 GNA11P29992 359 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 PAFAH1B1P43034 410 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 STK4Q13043 487 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 SEPT2Q15019 361 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 FAM47AQ5JRC9 791 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 ICE2Q659A1 982 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 TADA2BQ86TJ2 420 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 CAPS2Q9BXY5 557 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 RIC8AQ9NPQ8 531 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 LUC7LQ9NQ29 371 aaKnown RBP16.91■□□□□ 0.3
C9orf3-204ENST00000424143 IL17RBQ9NRM6 502 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 STIM2Q9P246 746 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 ARHGAP20Q9P2F6 1191 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 LRWD1Q9UFC0 647 aa16.91■□□□□ 0.3
C9orf3-204ENST00000424143 PES1O00541 588 aaKnown RBP16.9■□□□□ 0.3
C9orf3-204ENST00000424143 EBAG9O00559 213 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 CES2O00748 559 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 NMT2O60551 498 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 KIF11P52732 1056 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 PPP4CP60510 307 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 NONOQ15233 471 aaKnown RBP eCLIP16.9■□□□□ 0.3
C9orf3-204ENST00000424143 CCDC96Q2M329 555 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 TYW1BQ6NUM6 668 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 LRRC15Q8TF66 581 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 CALML4Q96GE6 196 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 NDST4Q9H3R1 872 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms