RNA–Protein interactions for RNA: ENST00000424017.1

AP000235.1-201, humanhuman

TSL 3 BASIC

Gene AP000235.1, Length 479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000235.1-201ENST00000424017 PTCHD1Q96NR3 888 aa3.71□□□□□ -1.82
AP000235.1-201ENST00000424017 NOX5Q96PH1 765 aa3.71□□□□□ -1.82
AP000235.1-201ENST00000424017 CDK5RAP1Q96SZ6 601 aaKnown RBP3.71□□□□□ -1.82
AP000235.1-201ENST00000424017 VPS11Q9H270 941 aa3.71□□□□□ -1.82
AP000235.1-201ENST00000424017 KBTBD4Q9NVX7 518 aa3.71□□□□□ -1.82
AP000235.1-201ENST00000424017 SPATA6Q9NWH7 488 aaPredicted RBP3.71□□□□□ -1.82
AP000235.1-201ENST00000424017 SF3B6Q9Y3B4 125 aaKnown RBP3.71□□□□□ -1.82
AP000235.1-201ENST00000424017 MROH6A6NGR9 719 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 ZBTB7AO95365 584 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 ZNF165P49910 485 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 POU4F1Q01851 419 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 MCTP2Q6DN12 878 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 TMC4Q7Z404 712 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 TSPAN17Q96FV3 270 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 KRTAP3-1Q9BYR8 98 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 DEF6Q9H4E7 631 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 EHMT1Q9H9B1 1298 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 JADE2Q9NQC1 790 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 SUCOQ9UBS9 1254 aaKnown RBP3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 TSC22D4Q9Y3Q8 395 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 RWDD3Q9Y3V2 267 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 HS3ST3A1Q9Y663 406 aa3.7□□□□□ -1.82
AP000235.1-201ENST00000424017 NPEPPSL1A6NEC2 478 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 AMHP03971 560 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 GLI4P10075 376 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 CLCQ05315 142 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 APOBRQ0VD83 1088 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 TRIM26Q12899 539 aaPredicted RBP3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 TDRD10Q5VZ19 366 aaKnown RBP3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 FIBCD1Q8N539 461 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 NLGN2Q8NFZ4 835 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 ZNF296Q8WUU4 475 aaPredicted RBP3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 CPA5Q8WXQ8 436 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 ZDHHC15Q96MV8 337 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 FCRL3Q96P31 734 aaPredicted RBP3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 SLC9A7Q96T83 725 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 LRRC3Q9BY71 257 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 PCDH18Q9HCL0 1135 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 FAM86C1Q9NVL1 165 aa3.69□□□□□ -1.82
AP000235.1-201ENST00000424017 TP53P04637 393 aaPredicted RBP3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 IFNGR1P15260 489 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 GARTP22102 1010 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 ACVRL1P37023 503 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 ZNF445P59923 1031 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 PPP2R5DQ14738 602 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 SURF1Q15526 300 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 FAM26FQ5R3K3 315 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 CRIP3Q6Q6R5 217 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 PALM2Q8IXS6 379 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 REXO1Q8N1G1 1221 aaKnown RBP3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 RNF34Q969K3 372 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 LCORQ96JN0 433 aaPredicted RBP3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 ZNF341Q9BYN7 854 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 KLC2Q9H0B6 622 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 NOL6Q9H6R4 1146 aaKnown RBP3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 COPRSQ9NQ92 184 aa3.68□□□□□ -1.82
AP000235.1-201ENST00000424017 C9IYK1 514 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 DDX3XO00571 662 aaKnown RBP eCLIP3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 TNFRSF10CO14798 259 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 LAMTOR5O43504 91 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 CYP1A1P04798 512 aaPredicted RBP3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 ITGA4P13612 1032 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 RPL13P26373 211 aaKnown RBP3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 CRKP46108 304 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 TCEAL1Q15170 157 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 PRAMEF18Q5VWM3 479 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 DCAF15Q66K64 600 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 ZNF585AQ6P3V2 769 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 CD300LDQ6UXZ3 194 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 PLEKHH3Q7Z736 793 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 ZC3H18Q86VM9 953 aaKnown RBP3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 Q8N1X5 172 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 NETO2Q8NC67 525 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 SMARCC1Q92922 1105 aaPredicted RBP3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 NKD1Q969G9 470 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 GORASP1Q9BQQ3 440 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 C11orf84Q9BUA3 381 aaPredicted RBP3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 ZNF747Q9BV97 191 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 SRRTQ9BXP5 876 aaKnown RBP3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 GP6Q9HCN6 339 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 UBP1Q9NZI7 540 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 FHOD1Q9Y613 1164 aa3.67□□□□□ -1.82
AP000235.1-201ENST00000424017 SUPT5HO00267 1087 aaKnown RBP3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 GREM1O60565 184 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 THBS2P35442 1172 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 SEPHS1P49903 392 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 PMS1P54277 932 aaKnown RBP3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 EEF1DP3Q658K8 133 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 ETV3LQ6ZN32 361 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 STK32CQ86UX6 486 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 CIR1Q86X95 450 aaPredicted RBP3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 TTLL6Q8N841 843 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 LINC00482Q8N8I6 264 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 KYQ8NBH2 561 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 TXNDC5Q8NBS9 432 aaKnown RBP3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 GULP1Q9UBP9 304 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 TCAF1Q9Y4C2 921 aa3.66□□□□□ -1.82
AP000235.1-201ENST00000424017 PATL2C9JE40 543 aaKnown RBP3.65□□□□□ -1.83
AP000235.1-201ENST00000424017 SHOXO15266 292 aa3.65□□□□□ -1.83
AP000235.1-201ENST00000424017 FUCA1P04066 466 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms