RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 KRIT1O00522 736 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 MCF2LO15068 1137 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
TNC-203ENST00000423613 NOP14P78316 857 aaKnown RBP12.11□□□□□ -0.47
TNC-203ENST00000423613 CCDC85BQ15834 202 aaPredicted RBP12.11□□□□□ -0.47
TNC-203ENST00000423613 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 ZNF518AQ6AHZ1 1483 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 SAT1P21673 171 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 ZNF449Q6P9G9 518 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 WDR75Q8IWA0 830 aaKnown RBP12.11□□□□□ -0.47
TNC-203ENST00000423613 PARD3BQ8TEW8 1205 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 BLZF1Q9H2G9 400 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 LMBRD1Q9NUN5 540 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 LRFN2Q9ULH4 789 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 KCNK3O14649 394 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 ZBTB22O15209 634 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 PER1O15534 1290 aaPredicted RBP12.11□□□□□ -0.47
TNC-203ENST00000423613 HERC4Q5GLZ8 1057 aaPredicted RBP12.11□□□□□ -0.47
TNC-203ENST00000423613 OLFML2BQ68BL8 750 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 BABAM1Q9NWV8 329 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 ASXL2Q76L83 1435 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 BUB1O43683 1085 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 ADCY8P40145 1251 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 MRPL28Q13084 256 aaKnown RBP12.11□□□□□ -0.47
TNC-203ENST00000423613 KRT25Q7Z3Z0 450 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 NELFCDQ8IXH7 590 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 STAMQ92783 540 aa12.11□□□□□ -0.47
TNC-203ENST00000423613 hCG_1642624A0A1W2PR95 340 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 ENO4A6NNW6 628 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 DAB1O75553 588 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 NPR1P16066 1061 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 IRX1P78414 480 aaPredicted RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 GDAP1Q8TB36 358 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 TXLNGQ9NUQ3 528 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 GSTA4O15217 222 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 ZNF500O60304 480 aaPredicted RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 TRIM56Q9BRZ2 755 aaKnown RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 OSBPL1AQ9BXW6 950 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 H0Y3Z8 333 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 CHL1O00533 1208 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 ZAP70P43403 619 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 IGBP1P78318 339 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 MYCT1Q8N699 235 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 CALR3Q96L12 384 aaKnown RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 DNAJC5BQ9UF47 199 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 WARS2Q9UGM6 360 aaKnown RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 COL17A1Q9UMD9 1497 aaPredicted RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 ZNF532Q9HCE3 1301 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 HOXB7P09629 217 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 TRPC1P48995 793 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 IL9RQ01113 521 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 CCDC124Q96CT7 223 aaKnown RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 HDAC11Q96DB2 347 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 SBNO1A3KN83 1393 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 A1BGP04217 495 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 PNOCQ13519 176 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 ZBTB33Q86T24 672 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 CABP7Q86V35 215 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 ABI1Q8IZP0 508 aa12.1□□□□□ -0.47
TNC-203ENST00000423613 TAB3Q8N5C8 712 aaPredicted RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 SKA2Q8WVK7 121 aaPredicted RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 IFIH1Q9BYX4 1025 aaKnown RBP12.1□□□□□ -0.47
TNC-203ENST00000423613 TMED10P49755 219 aaKnown RBP12.09□□□□□ -0.47
TNC-203ENST00000423613 BLVRAP53004 296 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 GYS2P54840 703 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 CALCRLQ16602 461 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 DCUN1D2Q6PH85 259 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 SPATA5Q8NB90 893 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 KCNA6P17658 529 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
TNC-203ENST00000423613 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.47
TNC-203ENST00000423613 TADA2BQ86TJ2 420 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 C2CD5Q86YS7 1000 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 TEX2Q8IWB9 1127 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 CACTINQ8WUQ7 758 aaKnown RBP12.09□□□□□ -0.47
TNC-203ENST00000423613 RSAD2Q8WXG1 361 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 LPIN2Q92539 896 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
TNC-203ENST00000423613 BIVM-ERCC5R4GMW8 1640 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 ZMYND10O75800 440 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 KLHL30Q0D2K2 578 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 ASPHQ12797 758 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 MAPKAPK5Q8IW41 473 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 HIPK4Q8NE63 616 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 RAPGEF5Q92565 580 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 E7EWF7 191 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 HLA-DPA1P20036 260 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 TGFBRAP1Q8WUH2 860 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 GLT8D2Q9H1C3 349 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 VPS54Q9P1Q0 977 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
TNC-203ENST00000423613 LMNB1P20700 586 aa12.09□□□□□ -0.47
TNC-203ENST00000423613 DEUP1Q05D60 604 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms