RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 RAG1P15918 1043 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 KIF5BP33176 963 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 MCM5P33992 734 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 GNAQP50148 359 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 CPT1AP50416 773 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 SEC23AQ15436 765 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 FSCN1Q16658 493 aaKnown RBP10.06□□□□□ -0.8
MDC1-204ENST00000422266 USH1GQ495M9 461 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 DUSP28Q4G0W2 176 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 CCSAPQ6IQ19 270 aaPredicted RBP10.06□□□□□ -0.8
MDC1-204ENST00000422266 RASGRP2Q7LDG7 609 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 NSUN6Q8TEA1 469 aaKnown RBP10.06□□□□□ -0.8
MDC1-204ENST00000422266 SCFD2Q8WU76 684 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 CLEC4DQ8WXI8 215 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 TMEM87BQ96K49 555 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 LZTS2Q9BRK4 669 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 UBA5Q9GZZ9 404 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 KATNBL1Q9H079 304 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 GPHNQ9NQX3 736 aaPredicted RBP10.06□□□□□ -0.8
MDC1-204ENST00000422266 TMEM39AQ9NV64 488 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 POLR3EQ9NVU0 708 aa10.06□□□□□ -0.8
MDC1-204ENST00000422266 GNEQ9Y223 722 aaKnown RBP10.06□□□□□ -0.8
MDC1-204ENST00000422266 RBM8AQ9Y5S9 174 aaKnown RBP10.06□□□□□ -0.8
MDC1-204ENST00000422266 ARVCFO00192 962 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 ZBTB5O15062 677 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 NEFLP07196 543 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 CALM1P0DP23 149 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 CALM2P0DP24 149 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 CALM3P0DP25 149 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 EDNRBP24530 442 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 SMARCA1P28370 1054 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 MDM2Q00987 491 aaPredicted RBP10.05□□□□□ -0.8
MDC1-204ENST00000422266 PTH1RQ03431 593 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 TLE2Q04725 743 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 TTLL4Q14679 1199 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 PPP2R5BQ15173 497 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 STXBP2Q15833 593 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 QRICH1Q2TAL8 776 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 TMEM67Q5HYA8 995 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 CTCFLQ8NI51 663 aaPredicted RBP10.05□□□□□ -0.8
MDC1-204ENST00000422266 ESYT1Q9BSJ8 1104 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 WDR11Q9BZH6 1224 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 IL25Q9H293 177 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 PDLIM7Q9NR12 457 aa10.05□□□□□ -0.8
MDC1-204ENST00000422266 RBM47A0AV96 593 aaKnown RBP10.04□□□□□ -0.8
MDC1-204ENST00000422266 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
MDC1-204ENST00000422266 KIAA0355O15063 1070 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 DYNC1LI2O43237 492 aaPredicted RBP10.04□□□□□ -0.8
MDC1-204ENST00000422266 PQBP1O60828 265 aaKnown RBP10.04□□□□□ -0.8
MDC1-204ENST00000422266 DDAH1O94760 285 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 SUPT20HL2P0C7V6 817 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 SMPD1P17405 629 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 GRM4Q14833 912 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 TAPT1Q6NXT6 567 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 KCNV1Q6PIU1 500 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 CYB5R4Q7L1T6 521 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 EEPD1Q7L9B9 569 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 FBXO16Q8IX29 292 aaPredicted RBP10.04□□□□□ -0.8
MDC1-204ENST00000422266 CCDC136Q96JN2 1154 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 JMJD4Q9H9V9 463 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 VAT1LQ9HCJ6 419 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 ANO2Q9NQ90 1003 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 MAD2L2Q9UI95 211 aa10.04□□□□□ -0.8
MDC1-204ENST00000422266 PNMA6FA0A0J9YX94 578 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.03□□□□□ -0.8
MDC1-204ENST00000422266 CCDC69A6NI79 296 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 HMGB1P09429 215 aaKnown RBP10.03□□□□□ -0.8
MDC1-204ENST00000422266 LIFRP42702 1097 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 CDK7P50613 346 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 GHRHRQ02643 423 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 KRT32Q14532 448 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 ARHGEF16Q5VV41 709 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 SLC30A10Q6XR72 485 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 SYNE3Q6ZMZ3 975 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 NFXL1Q6ZNB6 911 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 TMEM199Q8N511 208 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 LENG1Q96BZ8 264 aaPredicted RBP10.03□□□□□ -0.8
MDC1-204ENST00000422266 MTMR8Q96EF0 704 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 RMDN3Q96TC7 470 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 RIOX1Q9H6W3 641 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 SEC63Q9UGP8 760 aaKnown RBP10.03□□□□□ -0.8
MDC1-204ENST00000422266 PCDHA1Q9Y5I3 950 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 ASTN1O14525 1302 aa10.03□□□□□ -0.8
MDC1-204ENST00000422266 MYADML2A6NDP7 307 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 GCOM1H8Y6P7 765 aaPredicted RBP10.02□□□□□ -0.81
MDC1-204ENST00000422266 CDC45O75419 566 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 EIF3JO75822 258 aaKnown RBP10.02□□□□□ -0.81
MDC1-204ENST00000422266 STAM2O75886 525 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 CFBP00751 764 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 TIMP1P01033 207 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 POLR2MP0CAP2 368 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 TXNP10599 105 aaKnown RBP10.02□□□□□ -0.81
MDC1-204ENST00000422266 HSD17B4P51659 736 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 FPGSQ05932 587 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 FAAP100Q0VG06 881 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 TROAPQ12815 778 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 PPIGQ13427 754 aaKnown RBP eCLIP10.02□□□□□ -0.81
MDC1-204ENST00000422266 ITGA7Q13683 1181 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 TEX2Q8IWB9 1127 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 MB21D2Q8IYB1 491 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms