RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 CYP4F3Q08477 520 aa6.59□□□□□ -1.35
LINC00397-201ENST00000422074 PLEKHN1Q494U1 663 aaPredicted RBP6.59□□□□□ -1.35
LINC00397-201ENST00000422074 GTF2IRD2BQ6EKJ0 949 aa6.59□□□□□ -1.35
LINC00397-201ENST00000422074 GTF2IRD2Q86UP8 949 aa6.59□□□□□ -1.35
LINC00397-201ENST00000422074 LDHDQ86WU2 507 aa6.59□□□□□ -1.35
LINC00397-201ENST00000422074 MICAL1Q8TDZ2 1067 aa6.59□□□□□ -1.35
LINC00397-201ENST00000422074 MZB1Q8WU39 189 aa6.59□□□□□ -1.35
LINC00397-201ENST00000422074 MTA3Q9BTC8 594 aa6.59□□□□□ -1.35
LINC00397-201ENST00000422074 NKX2-4Q9H2Z4 354 aa6.59□□□□□ -1.35
LINC00397-201ENST00000422074 PODXL2Q9NZ53 605 aa6.59□□□□□ -1.35
LINC00397-201ENST00000422074 CNOT6Q9ULM6 557 aaKnown RBP6.59□□□□□ -1.35
LINC00397-201ENST00000422074 NPHP3-ACAD11A0A0J9YXS1 232 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 NUDT19A8MXV4 375 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 NOP56O00567 594 aaKnown RBP6.58□□□□□ -1.36
LINC00397-201ENST00000422074 SUSD5O60279 629 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 SCG5P05408 212 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 FBLN1P23142 703 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 ZNF385BQ569K4 471 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 LARP1BQ659C4 914 aaKnown RBP6.58□□□□□ -1.36
LINC00397-201ENST00000422074 MRM1Q6IN84 353 aaKnown RBP6.58□□□□□ -1.36
LINC00397-201ENST00000422074 TMC6Q7Z403 805 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 IGDCC3Q8IVU1 814 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 NPLOC4Q8TAT6 608 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 EPN3Q9H201 632 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 EPB41L4AQ9HCS5 686 aaPredicted RBP6.58□□□□□ -1.36
LINC00397-201ENST00000422074 KCTD3Q9Y597 815 aa6.58□□□□□ -1.36
LINC00397-201ENST00000422074 IGFBP6P24592 240 aaPredicted RBP6.57□□□□□ -1.36
LINC00397-201ENST00000422074 SCRN1Q12765 414 aa6.57□□□□□ -1.36
LINC00397-201ENST00000422074 SSPNQ14714 243 aa6.57□□□□□ -1.36
LINC00397-201ENST00000422074 TESK1Q15569 626 aa6.57□□□□□ -1.36
LINC00397-201ENST00000422074 ZC3H14Q6PJT7 736 aaKnown RBP6.57□□□□□ -1.36
LINC00397-201ENST00000422074 TMEFF1Q8IYR6 380 aa6.57□□□□□ -1.36
LINC00397-201ENST00000422074 DACT3Q96B18 629 aaPredicted RBP6.57□□□□□ -1.36
LINC00397-201ENST00000422074 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.57□□□□□ -1.36
LINC00397-201ENST00000422074 IRAK3Q9Y616 596 aa6.57□□□□□ -1.36
LINC00397-201ENST00000422074 C7orf72A4D263 438 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 B2RBV5 119 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 KLF4O43474 513 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 NUAK1O60285 661 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 DDAH1O94760 285 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 GJB6O95452 261 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 ITGAVP06756 1048 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 PLS3P13797 630 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 HOXC12P31275 282 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 DNAJA1P31689 397 aaKnown RBP6.56□□□□□ -1.36
LINC00397-201ENST00000422074 BICRALQ6AI39 1079 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 ZNF227Q86WZ6 799 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 TMEM151BQ8IW70 566 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 LZTR1Q8N653 840 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 NETO2Q8NC67 525 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 FRS2Q8WU20 508 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 CCDC140Q96MF4 163 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 FBLN5Q9UBX5 448 aa6.56□□□□□ -1.36
LINC00397-201ENST00000422074 A0A1W2PQJ5 194 aa6.55□□□□□ -1.36
LINC00397-201ENST00000422074 RFXAPO00287 272 aa6.55□□□□□ -1.36
LINC00397-201ENST00000422074 NPHS1O60500 1241 aa6.55□□□□□ -1.36
LINC00397-201ENST00000422074 THBDP07204 575 aa6.55□□□□□ -1.36
LINC00397-201ENST00000422074 CAP1Q01518 475 aa6.55□□□□□ -1.36
LINC00397-201ENST00000422074 E4F1Q66K89 784 aaPredicted RBP6.55□□□□□ -1.36
LINC00397-201ENST00000422074 MBLAC2Q68D91 279 aa6.55□□□□□ -1.36
LINC00397-201ENST00000422074 CPNE8Q86YQ8 564 aa6.55□□□□□ -1.36
LINC00397-201ENST00000422074 IRF2BPLQ9H1B7 796 aa6.55□□□□□ -1.36
LINC00397-201ENST00000422074 GPRC5CQ9NQ84 441 aa6.55□□□□□ -1.36
LINC00397-201ENST00000422074 CLEC1BQ9P126 229 aa6.55□□□□□ -1.36
LINC00397-201ENST00000422074 ARNTLO00327 626 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 TBX1O43435 398 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 PI3P19957 117 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 ZC3H6P61129 1189 aaKnown RBP6.54□□□□□ -1.36
LINC00397-201ENST00000422074 SV2CQ496J9 727 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 IQCEQ6IPM2 695 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 ANKS3Q6ZW76 656 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 EEPD1Q7L9B9 569 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 FAM129CQ86XR2 697 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 KREMEN2Q8NCW0 462 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 PLEKHO2Q8TD55 490 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 DPF3Q92784 378 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 TSPAN17Q96FV3 270 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 LGR4Q9BXB1 951 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 RNF38Q9H0F5 515 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 RAPGEFL1Q9UHV5 662 aa6.54□□□□□ -1.36
LINC00397-201ENST00000422074 F8W031 263 aaPredicted RBP6.53□□□□□ -1.36
LINC00397-201ENST00000422074 CPP00450 1065 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 TACR1P25103 407 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 PRR5P85299 388 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 SLC9A5Q14940 896 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 TARBP2Q15633 366 aaKnown RBP6.53□□□□□ -1.36
LINC00397-201ENST00000422074 SLC10A6Q3KNW5 377 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 ACBD5Q5T8D3 534 aaPredicted RBP6.53□□□□□ -1.36
LINC00397-201ENST00000422074 CABP7Q86V35 215 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 Q8N1Y9 231 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 CELF2-AS1Q8N7Q2 184 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 PANK1Q8TE04 598 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 BTN2A2Q8WVV5 523 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 HNRNPLLQ8WVV9 542 aaKnown RBP6.53□□□□□ -1.36
LINC00397-201ENST00000422074 GULP1Q9UBP9 304 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 RWDD3Q9Y3V2 267 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 HCFC2Q9Y5Z7 792 aa6.53□□□□□ -1.36
LINC00397-201ENST00000422074 ZC3H12DA2A288 527 aaKnown RBP6.52□□□□□ -1.37
LINC00397-201ENST00000422074 GFRA1P56159 465 aa6.52□□□□□ -1.37
LINC00397-201ENST00000422074 ZNF200P98182 395 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms