RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SEMA6BQ9H3T3 888 aa20.38■□□□□ 0.85
MSH6-203ENST00000420813 PTPDC1A2A3K4 754 aa20.37■□□□□ 0.85
MSH6-203ENST00000420813 DLL1O00548 723 aa20.37■□□□□ 0.85
MSH6-203ENST00000420813 DUSP28Q4G0W2 176 aa20.37■□□□□ 0.85
MSH6-203ENST00000420813 RNF207Q6ZRF8 634 aa20.37■□□□□ 0.85
MSH6-203ENST00000420813 KIAA1211Q6ZU35 1233 aa20.37■□□□□ 0.85
MSH6-203ENST00000420813 TMEM199Q8N511 208 aa20.37■□□□□ 0.85
MSH6-203ENST00000420813 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.36■□□□□ 0.85
MSH6-203ENST00000420813 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.36■□□□□ 0.85
MSH6-203ENST00000420813 RBM47A0AV96 593 aaKnown RBP20.36■□□□□ 0.85
MSH6-203ENST00000420813 ITGA7Q13683 1181 aa20.36■□□□□ 0.85
MSH6-203ENST00000420813 SLC30A10Q6XR72 485 aa20.36■□□□□ 0.85
MSH6-203ENST00000420813 ANKS1AQ92625 1134 aa20.36■□□□□ 0.85
MSH6-203ENST00000420813 MPHOSPH6Q99547 160 aaKnown RBP20.36■□□□□ 0.85
MSH6-203ENST00000420813 CDX2Q99626 313 aaPredicted RBP20.36■□□□□ 0.85
MSH6-203ENST00000420813 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.36■□□□□ 0.85
MSH6-203ENST00000420813 ZKSCAN3Q9BRR0 538 aa20.36■□□□□ 0.85
MSH6-203ENST00000420813 MAF1Q9H063 256 aa20.36■□□□□ 0.85
MSH6-203ENST00000420813 TTYH1Q9H313 450 aaPredicted RBP20.36■□□□□ 0.85
MSH6-203ENST00000420813 SCN10AQ9Y5Y9 1956 aa20.35■□□□□ 0.85
MSH6-203ENST00000420813 KDM4AO75164 1064 aa20.35■□□□□ 0.85
MSH6-203ENST00000420813 CALML3P27482 149 aa20.35■□□□□ 0.85
MSH6-203ENST00000420813 RPS6P62753 249 aaKnown RBP20.35■□□□□ 0.85
MSH6-203ENST00000420813 PNMA1Q8ND90 353 aa20.35■□□□□ 0.85
MSH6-203ENST00000420813 DNERQ8NFT8 737 aa20.35■□□□□ 0.85
MSH6-203ENST00000420813 WDR11Q9BZH6 1224 aa20.35■□□□□ 0.85
MSH6-203ENST00000420813 CTNNA3Q9UI47 895 aa20.35■□□□□ 0.85
MSH6-203ENST00000420813 KIAA1217Q5T5P2 1943 aa20.35■□□□□ 0.85
MSH6-203ENST00000420813 UNC80Q8N2C7 3258 aa20.35■□□□□ 0.85
MSH6-203ENST00000420813 GRIN2DO15399 1336 aa20.34■□□□□ 0.85
MSH6-203ENST00000420813 MYO9BQ13459 2157 aa20.34■□□□□ 0.85
MSH6-203ENST00000420813 PTGS1P23219 599 aa20.34■□□□□ 0.85
MSH6-203ENST00000420813 EDNRBP24530 442 aa20.34■□□□□ 0.85
MSH6-203ENST00000420813 IMMTQ16891 758 aaKnown RBP20.34■□□□□ 0.85
MSH6-203ENST00000420813 TMEM240Q5SV17 173 aa20.34■□□□□ 0.85
MSH6-203ENST00000420813 TMEM63BQ5T3F8 832 aa20.34■□□□□ 0.85
MSH6-203ENST00000420813 PSRC1Q6PGN9 363 aaPredicted RBP20.34■□□□□ 0.85
MSH6-203ENST00000420813 RGS22Q8NE09 1264 aa20.34■□□□□ 0.85
MSH6-203ENST00000420813 PPP1R12CQ9BZL4 782 aa20.34■□□□□ 0.85
MSH6-203ENST00000420813 KAT14Q9H8E8 782 aa20.34■□□□□ 0.85
MSH6-203ENST00000420813 B4DLN1 442 aa20.33■□□□□ 0.85
MSH6-203ENST00000420813 B4E1Z4 1266 aa20.33■□□□□ 0.85
MSH6-203ENST00000420813 GOLGA8HP0CJ92 632 aa20.33■□□□□ 0.85
MSH6-203ENST00000420813 CSF2RAP15509 400 aa20.33■□□□□ 0.85
MSH6-203ENST00000420813 CPT1AP50416 773 aa20.33■□□□□ 0.85
MSH6-203ENST00000420813 MRPL12P52815 198 aaKnown RBP20.33■□□□□ 0.85
MSH6-203ENST00000420813 ASPRV1Q53RT3 343 aa20.33■□□□□ 0.85
MSH6-203ENST00000420813 RASIP1Q5U651 963 aa20.33■□□□□ 0.85
MSH6-203ENST00000420813 C16orf59Q7L2K0 433 aa20.33■□□□□ 0.85
MSH6-203ENST00000420813 ZSCAN10Q96SZ4 725 aaPredicted RBP20.33■□□□□ 0.85
MSH6-203ENST00000420813 KRT23Q9C075 422 aa20.33■□□□□ 0.85
MSH6-203ENST00000420813 POLR3EQ9NVU0 708 aa20.33■□□□□ 0.85
MSH6-203ENST00000420813 GBF1Q92538 1859 aa20.33■□□□□ 0.84
MSH6-203ENST00000420813 CDH23Q9H251 3354 aa20.32■□□□□ 0.84
MSH6-203ENST00000420813 NKRFO15226 690 aaKnown RBP eCLIP20.32■□□□□ 0.84
MSH6-203ENST00000420813 DNAJB2P25686 324 aa20.32■□□□□ 0.84
MSH6-203ENST00000420813 PDE4DQ08499 809 aa20.32■□□□□ 0.84
MSH6-203ENST00000420813 ENAHQ8N8S7 591 aaPredicted RBP20.32■□□□□ 0.84
MSH6-203ENST00000420813 UBA5Q9GZZ9 404 aa20.32■□□□□ 0.84
MSH6-203ENST00000420813 HIPK3Q9H422 1215 aa20.32■□□□□ 0.84
MSH6-203ENST00000420813 CNNM2Q9H8M5 875 aa20.32■□□□□ 0.84
MSH6-203ENST00000420813 ZSWIM5Q9P217 1185 aa20.32■□□□□ 0.84
MSH6-203ENST00000420813 ABCB11O95342 1321 aa20.31■□□□□ 0.84
MSH6-203ENST00000420813 CYP2C18P33260 490 aa20.31■□□□□ 0.84
MSH6-203ENST00000420813 CDC37Q16543 378 aaPredicted RBP20.31■□□□□ 0.84
MSH6-203ENST00000420813 USH1GQ495M9 461 aa20.31■□□□□ 0.84
MSH6-203ENST00000420813 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.31■□□□□ 0.84
MSH6-203ENST00000420813 SCFD2Q8WU76 684 aa20.31■□□□□ 0.84
MSH6-203ENST00000420813 IL23AQ9NPF7 189 aa20.31■□□□□ 0.84
MSH6-203ENST00000420813 TNKSO95271 1327 aa20.3■□□□□ 0.84
MSH6-203ENST00000420813 RAD50Q92878 1312 aa20.3■□□□□ 0.84
MSH6-203ENST00000420813 B4GALT4O60513 344 aa20.3■□□□□ 0.84
MSH6-203ENST00000420813 PSMC6P62333 389 aa20.3■□□□□ 0.84
MSH6-203ENST00000420813 PURAQ00577 322 aaKnown RBP20.3■□□□□ 0.84
MSH6-203ENST00000420813 PPP2R5BQ15173 497 aa20.3■□□□□ 0.84
MSH6-203ENST00000420813 BRDTQ58F21 947 aaPredicted RBP20.3■□□□□ 0.84
MSH6-203ENST00000420813 ZNF365Q70YC5 407 aa20.3■□□□□ 0.84
MSH6-203ENST00000420813 OR6J1Q8NGC5 347 aa20.3■□□□□ 0.84
MSH6-203ENST00000420813 MYLIPQ8WY64 445 aa20.3■□□□□ 0.84
MSH6-203ENST00000420813 NOC4LQ9BVI4 516 aaKnown RBP20.3■□□□□ 0.84
MSH6-203ENST00000420813 CPVLQ9H3G5 476 aa20.3■□□□□ 0.84
MSH6-203ENST00000420813 EYSQ5T1H1 3165 aa20.3■□□□□ 0.84
MSH6-203ENST00000420813 ACRP10323 421 aa20.29■□□□□ 0.84
MSH6-203ENST00000420813 ADGRF4Q8IZF3 695 aa20.29■□□□□ 0.84
MSH6-203ENST00000420813 MAFAQ8NHW3 353 aaPredicted RBP20.29■□□□□ 0.84
MSH6-203ENST00000420813 HERVK_113Q902F9 699 aa20.29■□□□□ 0.84
MSH6-203ENST00000420813 UBAC1Q9BSL1 405 aa20.29■□□□□ 0.84
MSH6-203ENST00000420813 TRPV6Q9H1D0 765 aa20.29■□□□□ 0.84
MSH6-203ENST00000420813 ALDH8A1Q9H2A2 487 aaPredicted RBP20.29■□□□□ 0.84
MSH6-203ENST00000420813 MTIF3Q9H2K0 278 aaKnown RBP20.29■□□□□ 0.84
MSH6-203ENST00000420813 KPNA6O60684 536 aa20.28■□□□□ 0.84
MSH6-203ENST00000420813 PARP1P09874 1014 aaKnown RBP20.28■□□□□ 0.84
MSH6-203ENST00000420813 FOSL2P15408 326 aa20.28■□□□□ 0.84
MSH6-203ENST00000420813 TIFAQ96CG3 184 aa20.28■□□□□ 0.84
MSH6-203ENST00000420813 MTG1Q9BT17 334 aaPredicted RBP20.28■□□□□ 0.84
MSH6-203ENST00000420813 GPHNQ9NQX3 736 aaPredicted RBP20.28■□□□□ 0.84
MSH6-203ENST00000420813 TANC1Q9C0D5 1861 aa20.28■□□□□ 0.84
MSH6-203ENST00000420813 UMODL1Q5DID0 1318 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 PRUNE2Q8WUY3 3088 aa20.27■□□□□ 0.84
MSH6-203ENST00000420813 A6NJR5 290 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms