RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PCDHA5Q9Y5H7 936 aa23.76■■□□□ 1.39
GPC1-202ENST00000420138 AP3B2Q13367 1082 aa23.75■■□□□ 1.39
GPC1-202ENST00000420138 POSTNQ15063 836 aa23.75■■□□□ 1.39
GPC1-202ENST00000420138 DPCR1Q3MIW9 517 aa23.75■■□□□ 1.39
GPC1-202ENST00000420138 CCDC174Q6PII3 467 aa23.75■■□□□ 1.39
GPC1-202ENST00000420138 GRAMD1CQ8IYS0 662 aa23.75■■□□□ 1.39
GPC1-202ENST00000420138 PP2D1A8MPX8 630 aa23.75■■□□□ 1.39
GPC1-202ENST00000420138 BIN1O00499 593 aa23.75■■□□□ 1.39
GPC1-202ENST00000420138 AP5Z1O43299 807 aa23.75■■□□□ 1.39
GPC1-202ENST00000420138 USP2O75604 605 aaPredicted RBP23.75■■□□□ 1.39
GPC1-202ENST00000420138 VCAM1P19320 739 aa23.75■■□□□ 1.39
GPC1-202ENST00000420138 NOL9Q5SY16 702 aaKnown RBP23.75■■□□□ 1.39
GPC1-202ENST00000420138 NT5DC1Q5TFE4 455 aa23.75■■□□□ 1.39
GPC1-202ENST00000420138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.75■■□□□ 1.39
GPC1-202ENST00000420138 ZNF536O15090 1300 aa23.74■■□□□ 1.39
GPC1-202ENST00000420138 PIK3CDO00329 1044 aa23.74■■□□□ 1.39
GPC1-202ENST00000420138 SARSP49591 514 aaKnown RBP23.74■■□□□ 1.39
GPC1-202ENST00000420138 BACE1P56817 501 aa23.74■■□□□ 1.39
GPC1-202ENST00000420138 NLRP12P59046 1061 aa23.74■■□□□ 1.39
GPC1-202ENST00000420138 ZNF280CQ8ND82 737 aa23.74■■□□□ 1.39
GPC1-202ENST00000420138 SPATA20Q8TB22 786 aa23.74■■□□□ 1.39
GPC1-202ENST00000420138 PICK1Q9NRD5 415 aa23.74■■□□□ 1.39
GPC1-202ENST00000420138 KANK3Q6NY19 840 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 USP25Q9UHP3 1055 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 CLCN1P35523 988 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 TRAF1Q13077 416 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 CALCRLQ16602 461 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 MCTP2Q6DN12 878 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 PDXDC2PQ6P474 469 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 IGSF22Q8N9C0 903 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 PRPF38AQ8NAV1 312 aaKnown RBP23.73■■□□□ 1.39
GPC1-202ENST00000420138 PAGE5Q96GU1 130 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 MBOAT7Q96N66 472 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 SLF1Q9BQI6 1058 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 CCSER1Q9C0I3 900 aa23.73■■□□□ 1.39
GPC1-202ENST00000420138 OTOFQ9HC10 1997 aa23.72■■□□□ 1.39
GPC1-202ENST00000420138 BMP6P22004 513 aa23.72■■□□□ 1.39
GPC1-202ENST00000420138 USP11P51784 963 aa23.72■■□□□ 1.39
GPC1-202ENST00000420138 USP14P54578 494 aa23.72■■□□□ 1.39
GPC1-202ENST00000420138 PRKG1Q13976 671 aa23.72■■□□□ 1.39
GPC1-202ENST00000420138 LDHDQ86WU2 507 aa23.72■■□□□ 1.39
GPC1-202ENST00000420138 TBC1D5Q92609 795 aa23.72■■□□□ 1.39
GPC1-202ENST00000420138 AK8Q96MA6 479 aa23.72■■□□□ 1.39
GPC1-202ENST00000420138 AS3MTQ9HBK9 375 aa23.72■■□□□ 1.39
GPC1-202ENST00000420138 ZHX2Q9Y6X8 837 aa23.72■■□□□ 1.39
GPC1-202ENST00000420138 CYP3A7-CYP3A51PA0A087WV96 503 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 GCFC2P16383 781 aaKnown RBP23.71■■□□□ 1.39
GPC1-202ENST00000420138 CYP3A7P24462 503 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 HOXA13P31271 388 aaPredicted RBP23.71■■□□□ 1.39
GPC1-202ENST00000420138 KARSQ15046 597 aaKnown RBP23.71■■□□□ 1.39
GPC1-202ENST00000420138 ISM2Q6H9L7 571 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 TEX2Q8IWB9 1127 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 DHX40Q8IX18 779 aaKnown RBP23.71■■□□□ 1.39
GPC1-202ENST00000420138 IQUBQ8NA54 791 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 HAS1Q92839 578 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 C12orf42Q96LP6 360 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 MTRQ99707 1265 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 DDX25Q9UHL0 483 aaKnown RBP23.71■■□□□ 1.39
GPC1-202ENST00000420138 HOOK1Q9UJC3 728 aaKnown RBP23.71■■□□□ 1.39
GPC1-202ENST00000420138 CLEC11AQ9Y240 323 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 PHIPQ8WWQ0 1821 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 PAPPA2Q9BXP8 1791 aa23.71■■□□□ 1.39
GPC1-202ENST00000420138 FOSP01100 380 aaPredicted RBP23.7■■□□□ 1.39
GPC1-202ENST00000420138 TECP42680 631 aa23.7■■□□□ 1.39
GPC1-202ENST00000420138 NAALADL2Q58DX5 795 aa23.7■■□□□ 1.39
GPC1-202ENST00000420138 SAMD1Q6SPF0 538 aaPredicted RBP23.7■■□□□ 1.39
GPC1-202ENST00000420138 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.7■■□□□ 1.39
GPC1-202ENST00000420138 ZSCAN30Q86W11 494 aa23.7■■□□□ 1.39
GPC1-202ENST00000420138 CEP57L1Q8IYX8 460 aa23.7■■□□□ 1.39
GPC1-202ENST00000420138 LRRC15Q8TF66 581 aa23.7■■□□□ 1.39
GPC1-202ENST00000420138 RPAP3Q9H6T3 665 aaPredicted RBP23.7■■□□□ 1.39
GPC1-202ENST00000420138 ICAM1P05362 532 aa23.7■■□□□ 1.38
GPC1-202ENST00000420138 SREBF1P36956 1147 aa23.7■■□□□ 1.38
GPC1-202ENST00000420138 FXR2P51116 673 aaKnown RBP eCLIP23.7■■□□□ 1.38
GPC1-202ENST00000420138 ARHGAP4P98171 946 aa23.7■■□□□ 1.38
GPC1-202ENST00000420138 AGBL1Q96MI9 1066 aa23.7■■□□□ 1.38
GPC1-202ENST00000420138 PYM1Q9BRP8 204 aaKnown RBP23.7■■□□□ 1.38
GPC1-202ENST00000420138 MMTAG2Q9BU76 263 aaKnown RBP23.7■■□□□ 1.38
GPC1-202ENST00000420138 DISC1Q9NRI5 854 aa23.7■■□□□ 1.38
GPC1-202ENST00000420138 MAN1B1Q9UKM7 699 aa23.7■■□□□ 1.38
GPC1-202ENST00000420138 PPP1R12BO60237 982 aaPredicted RBP23.69■■□□□ 1.38
GPC1-202ENST00000420138 NF2P35240 595 aa23.69■■□□□ 1.38
GPC1-202ENST00000420138 TXKP42681 527 aa23.69■■□□□ 1.38
GPC1-202ENST00000420138 MOXD1Q6UVY6 613 aa23.69■■□□□ 1.38
GPC1-202ENST00000420138 CDCA5Q96FF9 252 aa23.69■■□□□ 1.38
GPC1-202ENST00000420138 BPIFA3Q9BQP9 254 aa23.69■■□□□ 1.38
GPC1-202ENST00000420138 RRAGCQ9HB90 399 aa23.69■■□□□ 1.38
GPC1-202ENST00000420138 SLC38A10Q9HBR0 1119 aa23.69■■□□□ 1.38
GPC1-202ENST00000420138 PPP1R9AQ9ULJ8 1098 aa23.69■■□□□ 1.38
GPC1-202ENST00000420138 MRPL11Q9Y3B7 192 aaKnown RBP23.69■■□□□ 1.38
GPC1-202ENST00000420138 AFG3L2Q9Y4W6 797 aa23.69■■□□□ 1.38
GPC1-202ENST00000420138 SNCAIPQ9Y6H5 919 aa23.69■■□□□ 1.38
GPC1-202ENST00000420138 ABCB11O95342 1321 aa23.68■■□□□ 1.38
GPC1-202ENST00000420138 TXLNAP40222 546 aa23.68■■□□□ 1.38
GPC1-202ENST00000420138 AFMP43652 599 aa23.68■■□□□ 1.38
GPC1-202ENST00000420138 DPYDQ12882 1025 aa23.68■■□□□ 1.38
GPC1-202ENST00000420138 NAP1L4Q99733 375 aaKnown RBP23.68■■□□□ 1.38
GPC1-202ENST00000420138 TANGO6Q9C0B7 1094 aa23.68■■□□□ 1.38
GPC1-202ENST00000420138 CCDC39Q9UFE4 941 aa23.68■■□□□ 1.38
GPC1-202ENST00000420138 SPDYE3A6NKU9 549 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms