RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 FZD9O00144 591 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 PIK3CDO00329 1044 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 MEIS2O14770 477 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 RHOBTB3O94955 611 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 TDP2O95551 362 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 FOSP01100 380 aaPredicted RBP10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 PLCG1P19174 1290 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 CASP1P29466 404 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 CAP2P40123 477 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 PTGER2P43116 358 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 TNNI2P48788 182 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 CCZ1BP86790 482 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 CCZ1P86791 482 aaPredicted RBP10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 NOLC1Q14978 699 aaKnown RBP eCLIP10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 CALCRLQ16602 461 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 UBE2SQ16763 222 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 TMEM266Q2M3C6 531 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 TMEM119Q4V9L6 283 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 COBLL1Q53SF7 1204 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 HYIQ5T013 277 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 SPATA1Q5VX52 437 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 APTXQ7Z2E3 356 aaKnown RBP10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 FBXO11Q86XK2 927 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 VSTM4Q8IW00 320 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 LRRC8AQ8IWT6 810 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 TEPSINQ96N21 525 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 C7orf25Q9BPX7 421 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 ANO3Q9BYT9 981 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 TMEM39BQ9GZU3 492 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 SH2D4AQ9H788 454 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 VCPKMTQ9H867 229 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 KCNMB3Q9NPA1 279 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 INTS13Q9NVM9 706 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 FANCLQ9NW38 375 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 NFE2L3Q9Y4A8 694 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 PCDHA1Q9Y5I3 950 aa10.21□□□□□ -0.77
LINCMD1-201ENST00000418518 PTPRFP10586 1907 aa10.21□□□□□ -0.78
LINCMD1-201ENST00000418518 TMEM232C9JQI7 657 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 OPLAHO14841 1288 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 ASNSP08243 561 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 COL11A1P12107 1806 aaPredicted RBP10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 POLR2AP24928 1970 aaKnown RBP10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 CDC25AP30304 524 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 SREBF1P36956 1147 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 STAT2P52630 851 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 UBASH3AP57075 661 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 LRMPQ12912 555 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 GRB10Q13322 594 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 TNFAIP1Q13829 316 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 NBPF9Q3BBW0 867 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 KIAA1755Q5JYT7 1200 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 FAM160B2Q86V87 743 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 CDAN1Q8IWY9 1227 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 ACER1Q8TDN7 264 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 HAS1Q92839 578 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 WDR90Q96KV7 1748 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 NUP88Q99567 741 aaPredicted RBP10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 RAB34Q9BZG1 259 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 DEFB129Q9H1M3 183 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 RANBP17Q9H2T7 1088 aaKnown RBP10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 VEZTQ9HBM0 779 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 DDX25Q9UHL0 483 aaKnown RBP10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 RWDD2AQ9UIY3 292 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 PRR12Q9ULL5 1215 aa10.2□□□□□ -0.78
LINCMD1-201ENST00000418518 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 PHF20L1A8MW92 1017 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 TBX3O15119 743 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 CYP3A4P08684 503 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 CIITAP33076 1130 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 PPP1R2P41236 205 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 ECE1P42892 770 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 PRELPP51888 382 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 TBX2Q13207 712 aaPredicted RBP10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 TMC6Q7Z403 805 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 TRMT44Q8IYL2 757 aaKnown RBP10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 ADSSL1Q8N142 457 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 CHURC1Q8WUH1 139 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 CALML4Q96GE6 196 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 PNMA5Q96PV4 448 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 TRIM9Q9C026 710 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 BLZF1Q9H2G9 400 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 BLOC1S4Q9NUP1 217 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 LRWD1Q9UFC0 647 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 WDR81Q562E7 1941 aa10.19□□□□□ -0.78
LINCMD1-201ENST00000418518 KDM3AQ9Y4C1 1321 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 SHTN1A0MZ66 631 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 LRRC10BA6NIK2 292 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 USP17L15C9J2P7 530 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 USP17L13C9JLJ4 530 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 USP17L11C9JVI0 530 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 USP17L18D6R9N7 530 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 USP17L22D6RA61 530 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 USP17L17D6RBQ6 530 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 USP17L19D6RCP7 530 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 USP17L20D6RJB6 530 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 SERPINC1P01008 464 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 PBX1P40424 430 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 TECP42680 631 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 AMPD3Q01432 767 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 GHRHRQ02643 423 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms