RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ZNF75DP51815 510 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 SPDYE1Q8NFV5 336 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-205ENST00000418258 SLC8A2Q9UPR5 921 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 SRGAP2BP0DMP2 458 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 STX2P32856 288 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 MMEL1Q495T6 779 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 TTC30BQ8N4P2 665 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 MAGED2Q9UNF1 606 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-205ENST00000418258 LEMD3Q9Y2U8 911 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 SEMA3EO15041 775 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 ARHGAP6O43182 974 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 ADAM9Q13443 819 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 LMNTD2Q8IXW0 634 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 ERO1AQ96HE7 468 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 TTC1Q99614 292 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 JPH2Q9BR39 696 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-205ENST00000418258 AMNQ9BXJ7 453 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 SLC38A10Q9HBR0 1119 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 TYW1Q9NV66 732 aaKnown RBP12.25□□□□□ -0.45
PTCH1-205ENST00000418258 SEC24BO95487 1268 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 POLR2FP61218 127 aaKnown RBP12.25□□□□□ -0.45
PTCH1-205ENST00000418258 PTK2Q05397 1052 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 ELMSAN1Q6PJG2 1045 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 SLC10A4Q96EP9 437 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 YEATS2Q9ULM3 1422 aa12.25□□□□□ -0.45
PTCH1-205ENST00000418258 DDAH1O94760 285 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 ELF1P32519 619 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 RASSF2P50749 326 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 BFSP1Q12934 665 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 KSR1Q8IVT5 923 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 GJA10Q969M2 543 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 PPP1R16BQ96T49 567 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 KRT27Q7Z3Y8 459 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 ATP10DQ9P241 1426 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 ASPRV1Q53RT3 343 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 C7orf31Q8N865 590 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 SLC17A8Q8NDX2 589 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 KMT5AQ9NQR1 393 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 POLIQ9UNA4 740 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 PTPN22Q9Y2R2 807 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 ZMYM4Q5VZL5 1548 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 MARK3P27448 753 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 NSFP46459 744 aaKnown RBP12.24□□□□□ -0.45
PTCH1-205ENST00000418258 IQCB1Q15051 598 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 TRIM58Q8NG06 486 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 SLITRK6Q9H5Y7 841 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 ZFYVE16Q7Z3T8 1539 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 ARHGAP42A6NI28 874 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 PTGDRQ13258 359 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 AOC3Q16853 763 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 FAM182BQ5T319 152 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 PALD1Q9ULE6 856 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 SAR1BQ9Y6B6 198 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 ANXA13P27216 316 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 MIGA2Q7L4E1 593 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 MYLK4Q86YV6 388 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-205ENST00000418258 PSPC1Q8WXF1 523 aaKnown RBP12.24□□□□□ -0.45
PTCH1-205ENST00000418258 ZNF148Q9UQR1 794 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 UBN2Q6ZU65 1347 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 A6NNZ2 444 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 GDF11O95390 407 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 RPN1P04843 607 aaKnown RBP12.24□□□□□ -0.45
PTCH1-205ENST00000418258 SERPINB2P05120 415 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 TUBB8Q3ZCM7 444 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 LRRC24Q50LG9 513 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 FAM149B1Q96BN6 582 aa12.24□□□□□ -0.45
PTCH1-205ENST00000418258 ME3Q16798 604 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 TSNAXIP1Q2TAA8 658 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 GPATCH4Q5T3I0 446 aaKnown RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 RFX6Q8HWS3 928 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 DACT3Q96B18 629 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 ZNF274Q96GC6 653 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 STK38LQ9Y2H1 464 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 ABCC2Q92887 1545 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 ATP8B3O60423 1300 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 FMNL1O95466 1100 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 TFAMQ00059 246 aaKnown RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 CDKL2Q92772 493 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 TRIM35Q9UPQ4 493 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 FNDC3AQ9Y2H6 1198 aaKnown RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 ZNF233A6NK53 670 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 FGAP02671 866 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 ZNF653Q96CK0 615 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 ATF2P15336 505 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 CTNNA1P35221 906 aaKnown RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 HS1BP3Q53T59 392 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 ATP6V1E2Q96A05 226 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 CCDC17Q96LX7 622 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 BLMP54132 1417 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 PCP11498 1178 aaKnown RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 RNF10Q8N5U6 811 aaKnown RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 NACC1Q96RE7 527 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 HAUS8Q9BT25 410 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 METTL14Q9HCE5 456 aaKnown RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 ABCF3Q9NUQ8 709 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 KRT10P13645 584 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 ERFEQ4G0M1 354 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 RAB44Q7Z6P3 723 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms