RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 KIAA1755Q5JYT7 1200 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 ISM2Q6H9L7 571 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 CABP7Q86V35 215 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 GRAMD1CQ8IYS0 662 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 FEZ1Q99689 392 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 DDX25Q9UHL0 483 aaKnown RBP18.95■□□□□ 0.62
SSBP3-205ENST00000417664 ATAD5Q96QE3 1844 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 USP17L15C9J2P7 530 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 USP17L13C9JLJ4 530 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 USP17L11C9JVI0 530 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 USP17L18D6R9N7 530 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 USP17L22D6RA61 530 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 USP17L17D6RBQ6 530 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 USP17L19D6RCP7 530 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 USP17L20D6RJB6 530 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 SLC26A4O43511 780 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 TDP2O95551 362 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 USP17L24Q0WX57 530 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 USP17L6PQ6QN14 398 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 MBOAT7Q96N66 472 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 FHDC1Q9C0D6 1143 aaPredicted RBP18.95■□□□□ 0.62
SSBP3-205ENST00000417664 ZNF112Q9UJU3 913 aa18.95■□□□□ 0.62
SSBP3-205ENST00000417664 SPDYE3A6NKU9 549 aa18.94■□□□□ 0.62
SSBP3-205ENST00000417664 SLC37A4O43826 429 aa18.94■□□□□ 0.62
SSBP3-205ENST00000417664 TECP42680 631 aa18.94■□□□□ 0.62
SSBP3-205ENST00000417664 USP14P54578 494 aa18.94■□□□□ 0.62
SSBP3-205ENST00000417664 ENOX1Q8TC92 643 aaKnown RBP18.94■□□□□ 0.62
SSBP3-205ENST00000417664 CRYGNQ8WXF5 182 aa18.94■□□□□ 0.62
SSBP3-205ENST00000417664 CALML4Q96GE6 196 aa18.94■□□□□ 0.62
SSBP3-205ENST00000417664 GTPBP4Q9BZE4 634 aaKnown RBP18.94■□□□□ 0.62
SSBP3-205ENST00000417664 KBTBD4Q9NVX7 518 aa18.94■□□□□ 0.62
SSBP3-205ENST00000417664 MRPL11Q9Y3B7 192 aaKnown RBP18.94■□□□□ 0.62
SSBP3-205ENST00000417664 CDC25AP30304 524 aa18.93■□□□□ 0.62
SSBP3-205ENST00000417664 SREBF1P36956 1147 aa18.93■□□□□ 0.62
SSBP3-205ENST00000417664 TXKP42681 527 aa18.93■□□□□ 0.62
SSBP3-205ENST00000417664 USH1GQ495M9 461 aa18.93■□□□□ 0.62
SSBP3-205ENST00000417664 NAALADL2Q58DX5 795 aa18.93■□□□□ 0.62
SSBP3-205ENST00000417664 LRWD1Q9UFC0 647 aa18.93■□□□□ 0.62
SSBP3-205ENST00000417664 PNMA2Q9UL42 364 aa18.93■□□□□ 0.62
SSBP3-205ENST00000417664 PITPNM2Q9BZ72 1349 aa18.93■□□□□ 0.62
SSBP3-205ENST00000417664 MYH7BA7E2Y1 1941 aa18.93■□□□□ 0.62
SSBP3-205ENST00000417664 TBX3O15119 743 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 AMPD3Q01432 767 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 NBPF12Q5TAG4 269 aaPredicted RBP18.92■□□□□ 0.62
SSBP3-205ENST00000417664 ANGEL2Q5VTE6 544 aaKnown RBP18.92■□□□□ 0.62
SSBP3-205ENST00000417664 SLFN12Q8IYM2 578 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 KIFC2Q96AC6 838 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 WDR18Q9BV38 432 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 STK17AQ9UEE5 414 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 ASTN2O75129 1339 aaPredicted RBP18.92■□□□□ 0.62
SSBP3-205ENST00000417664 ABCB11O95342 1321 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 PP2D1A8MPX8 630 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 CLCN1P35523 988 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 ARHGAP4P98171 946 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 DRC7Q8IY82 874 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 SCYL3Q8IZE3 742 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 PRPF38AQ8NAV1 312 aaKnown RBP18.92■□□□□ 0.62
SSBP3-205ENST00000417664 MTRQ99707 1265 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 GLIS2Q9BZE0 524 aaPredicted RBP18.92■□□□□ 0.62
SSBP3-205ENST00000417664 AS3MTQ9HBK9 375 aa18.92■□□□□ 0.62
SSBP3-205ENST00000417664 SBF1O95248 1867 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 MARCH6O60337 910 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 CYP3A4P08684 503 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 FDX1P10109 184 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 CIITAP33076 1130 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 SNAP25P60880 206 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 KCNB1Q14721 858 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 ZYXQ15942 572 aaKnown RBP18.91■□□□□ 0.62
SSBP3-205ENST00000417664 Q4G0T1 1027 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 KRT79Q5XKE5 535 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 TTC12Q9H892 705 aaPredicted RBP18.91■□□□□ 0.62
SSBP3-205ENST00000417664 EHMT1Q9H9B1 1298 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 KCNMB3Q9NPA1 279 aa18.91■□□□□ 0.62
SSBP3-205ENST00000417664 OPLAHO14841 1288 aa18.9■□□□□ 0.62
SSBP3-205ENST00000417664 PLCG1P19174 1290 aa18.9■□□□□ 0.62
SSBP3-205ENST00000417664 DHX8Q14562 1220 aaKnown RBP18.9■□□□□ 0.62
SSBP3-205ENST00000417664 SUPT20HL1Q3ZLR7 823 aa18.9■□□□□ 0.62
SSBP3-205ENST00000417664 TRPM4Q8TD43 1214 aa18.9■□□□□ 0.62
SSBP3-205ENST00000417664 HAS1Q92839 578 aa18.9■□□□□ 0.62
SSBP3-205ENST00000417664 MMTAG2Q9BU76 263 aaKnown RBP18.9■□□□□ 0.62
SSBP3-205ENST00000417664 RRAGDQ9NQL2 400 aaPredicted RBP18.9■□□□□ 0.62
SSBP3-205ENST00000417664 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.9■□□□□ 0.62
SSBP3-205ENST00000417664 PCDHA12Q9UN75 941 aa18.9■□□□□ 0.62
SSBP3-205ENST00000417664 SCAF8Q9UPN6 1271 aaKnown RBP18.9■□□□□ 0.62
SSBP3-205ENST00000417664 STK24Q9Y6E0 443 aa18.9■□□□□ 0.62
SSBP3-205ENST00000417664 GCOM1H8Y6P7 765 aaPredicted RBP18.89■□□□□ 0.61
SSBP3-205ENST00000417664 CBFA2T2O43439 604 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 RPN1P04843 607 aaKnown RBP18.89■□□□□ 0.61
SSBP3-205ENST00000417664 POLR2MP0CAP2 368 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 HOXA7P31268 230 aaPredicted RBP18.89■□□□□ 0.61
SSBP3-205ENST00000417664 CUL4BQ13620 913 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 ZNF658Q5TYW1 1059 aaPredicted RBP18.89■□□□□ 0.61
SSBP3-205ENST00000417664 SAMD3Q8N6K7 520 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 SPC24Q8NBT2 197 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 CCDC47Q96A33 483 aaKnown RBP18.89■□□□□ 0.61
SSBP3-205ENST00000417664 SLF1Q9BQI6 1058 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 LRRC27Q9C0I9 530 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 HSD3B7Q9H2F3 369 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 GGA3Q9NZ52 723 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 DOCK1Q14185 1865 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms