RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 SLKQ9H2G2 1235 aaPredicted RBP20.24■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 ADD3Q9UEY8 706 aaKnown RBP20.24■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 MYH6P13533 1939 aa20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PTPDC1A2A3K4 754 aa20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 SOWAHBA6NEL2 793 aa20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 ASB14A6NK59 587 aa20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 CNTN2Q02246 1040 aa20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 CACNB2Q08289 660 aaPredicted RBP20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 SCRN1Q12765 414 aa20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PFKFB3Q16875 520 aaPredicted RBP20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 SYTL5Q8TDW5 730 aaPredicted RBP20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 MORC4Q8TE76 937 aa20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 TBC1D5Q92609 795 aa20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 NCOA5Q9HCD5 579 aaKnown RBP20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 LIMCH1Q9UPQ0 1083 aa20.23■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 CPLX1O14810 134 aa20.22■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PRKAR2AP13861 404 aaKnown RBP20.22■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 TRIM32Q13049 653 aa20.22■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 ME3Q16798 604 aa20.22■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PPP1R18Q6NYC8 613 aa20.22■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 SLC30A10Q6XR72 485 aa20.22■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 HMX1Q9NP08 348 aaPredicted RBP20.22■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PAK6Q9NQU5 681 aaPredicted RBP20.22■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 BARHL2Q9NY43 387 aa20.22■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 hCG_1642624A0A1W2PR95 340 aa20.21■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PIK3CDO00329 1044 aa20.21■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 CYP2C19P33261 490 aa20.21■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 STK3Q13188 491 aa20.21■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 MTFR1Q15390 333 aa20.21■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PKN1Q16512 942 aa20.21■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 ZSCAN31Q96LW9 406 aaPredicted RBP20.21■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 ASTN1O14525 1302 aa20.21■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PLXNA1Q9UIW2 1896 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 GCOM1H8Y6P7 765 aaPredicted RBP20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 ST18O60284 1047 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CDKL5O76039 1030 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 SNAI1O95863 264 aaPredicted RBP20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CFBP00751 764 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 GJB1P08034 283 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 POLR2MP0CAP2 368 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CYBAP13498 195 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CCL5P13501 91 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 SCG2P13521 617 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CALML3P27482 149 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 ALDH5A1P51649 535 aaPredicted RBP20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 AKAP17AQ02040 695 aaKnown RBP20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 WWC2Q6AWC2 1192 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 TRIM22Q8IYM9 498 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 FAM177A1Q8N128 213 aaPredicted RBP20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 PHKBQ93100 1093 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 GTF3C6Q969F1 213 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 TMEM106CQ9BVX2 250 aa20.2■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 B4DLN1 442 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 EDNRBP24530 442 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 MRPL12P52815 198 aaKnown RBP20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 SSRP1Q08945 709 aaKnown RBP20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 ARMCX2Q7L311 632 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 HEATR3Q7Z4Q2 680 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 IWS1Q96ST2 819 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 MPHOSPH6Q99547 160 aaKnown RBP20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.19■□□□□ 0.821e-14■■■■■ 62.2
COMMD3-BMI1-201ENST00000417470 RNF208Q9H0X6 261 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 GLT8D2Q9H1C3 349 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 UNC93B1Q9H1C4 597 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 ABHD16BQ9H3Z7 469 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 PSTPIP2Q9H939 334 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 SH2B1Q9NRF2 756 aaPredicted RBP20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 COL20A1Q9P218 1284 aa20.19■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 STXBP3O00186 592 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 MEIS2O14770 477 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 DEXIO95424 95 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 LARGE1O95461 756 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 MCM2P49736 904 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 TRPV1Q8NER1 839 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 NSUN6Q8TEA1 469 aaKnown RBP20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 GPKOWQ92917 476 aaPredicted RBP eCLIP20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 PURBQ96QR8 312 aaKnown RBP20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 TAAR1Q96RJ0 339 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 SLC26A6Q9BXS9 759 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 KATNBL1Q9H079 304 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 SH3GLB2Q9NR46 395 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CNPY2Q9Y2B0 182 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 STK36Q9NRP7 1315 aa20.18■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 ESYT2A0FGR8 921 aa20.17■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 MSCO60682 206 aa20.17■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 ZNF865P0CJ78 1059 aaPredicted RBP20.17■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 TYW1BQ6NUM6 668 aa20.17■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CCDC12Q8WUD4 166 aaPredicted RBP20.17■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CUL5Q93034 780 aa20.17■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 RMDN3Q96TC7 470 aa20.17■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 LCTP09848 1927 aa20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CCDC85CA6NKD9 419 aa20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 SEPT4O43236 478 aa20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CTDNEP1O95476 244 aa20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 CCND3P30281 292 aaPredicted RBP20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 GJA8P48165 433 aa20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 NAPAP54920 295 aa20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 ACVR2BQ13705 512 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms