RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 AP5M1Q9H0R1 490 aa8.24□□□□□ -1.09
COPS3-202ENST00000417352 GPCPD1Q9NPB8 672 aa8.24□□□□□ -1.09
COPS3-202ENST00000417352 RNF146Q9NTX7 359 aa8.24□□□□□ -1.09
COPS3-202ENST00000417352 CCPG1Q9ULG6 757 aa8.24□□□□□ -1.09
COPS3-202ENST00000417352 DDX49Q9Y6V7 483 aaKnown RBP8.24□□□□□ -1.09
COPS3-202ENST00000417352 FRMPD2Q68DX3 1309 aaPredicted RBP8.24□□□□□ -1.09
COPS3-202ENST00000417352 ROBO3Q96MS0 1386 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 IGKV6D-41A0A0C4DH26 115 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 MYADML2A6NDP7 307 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 MOXD2PA6NHM9 499 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 ASB14A6NK59 587 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 TLR3O15455 904 aaKnown RBP8.23□□□□□ -1.09
COPS3-202ENST00000417352 DYNC1LI2O43237 492 aaPredicted RBP8.23□□□□□ -1.09
COPS3-202ENST00000417352 ITGB8P26012 769 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 OAZ1P54368 228 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 RRP1P56182 461 aaKnown RBP8.23□□□□□ -1.09
COPS3-202ENST00000417352 HAND2P61296 217 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 FAAP100Q0VG06 881 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 VPS53Q5VIR6 699 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 MAMDC4Q6UXC1 1216 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 PPM1EQ8WY54 764 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 MYLIPQ8WY64 445 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 CDX2Q99626 313 aaPredicted RBP8.23□□□□□ -1.09
COPS3-202ENST00000417352 SEMA6BQ9H3T3 888 aa8.23□□□□□ -1.09
COPS3-202ENST00000417352 LTBP2Q14767 1821 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 DNAJC25-GNG10A0A024R161 153 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 A0A0U1RQG5 324 aaPredicted RBP8.22□□□□□ -1.09
COPS3-202ENST00000417352 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.22□□□□□ -1.09
COPS3-202ENST00000417352 ATP2A1O14983 1001 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 ZEB2O60315 1214 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 ADAMTS4O75173 837 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 TIMP1P01033 207 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 FDX1P10109 184 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 ACRP10323 421 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 FOSL2P15408 326 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 CALML3P27482 149 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 EPHB4P54760 987 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 SNX17Q15036 470 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 MCMDC2Q4G0Z9 681 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 MUM1L1Q5H9M0 696 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 C1orf53Q5VUE5 145 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 FAM109BQ6ICB4 259 aaPredicted RBP8.22□□□□□ -1.09
COPS3-202ENST00000417352 TTBK2Q6IQ55 1244 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 CXCL17Q6UXB2 119 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 MFSD6Q6ZSS7 791 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 KIAA1211Q6ZU35 1233 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 RASGRP2Q7LDG7 609 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
COPS3-202ENST00000417352 TMEM199Q8N511 208 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 MAFAQ8NHW3 353 aaPredicted RBP8.22□□□□□ -1.09
COPS3-202ENST00000417352 FAM227BQ96M60 508 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 GUCD1Q96NT3 240 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 PURBQ96QR8 312 aaKnown RBP8.22□□□□□ -1.09
COPS3-202ENST00000417352 LNPKQ9C0E8 428 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 IL17RBQ9NRM6 502 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 SEPT9Q9UHD8 586 aaPredicted RBP8.22□□□□□ -1.09
COPS3-202ENST00000417352 PRR12Q9ULL5 1215 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 MROH7Q68CQ1 1323 aa8.22□□□□□ -1.09
COPS3-202ENST00000417352 GREB1LQ9C091 1923 aaPredicted RBP8.21□□□□□ -1.09
COPS3-202ENST00000417352 COL6A3P12111 3177 aa8.21□□□□□ -1.09
COPS3-202ENST00000417352 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.21□□□□□ -1.1
COPS3-202ENST00000417352 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.21□□□□□ -1.1
COPS3-202ENST00000417352 ARVCFO00192 962 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 KIAA0355O15063 1070 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 ADCY6O43306 1168 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 DHX16O60231 1041 aaKnown RBP8.21□□□□□ -1.1
COPS3-202ENST00000417352 FGAP02671 866 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 CSF2RAP15509 400 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 CYP2C18P33260 490 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 PDE1AP54750 535 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 SMAD3P84022 425 aaKnown RBP8.21□□□□□ -1.1
COPS3-202ENST00000417352 PPIGQ13427 754 aaKnown RBP eCLIP8.21□□□□□ -1.1
COPS3-202ENST00000417352 FSCN1Q16658 493 aaKnown RBP8.21□□□□□ -1.1
COPS3-202ENST00000417352 TKFCQ3LXA3 575 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 NYAP1Q6ZVC0 841 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 ANKRD33Q7Z3H0 272 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 TLK2Q86UE8 772 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 FBXO16Q8IX29 292 aaPredicted RBP8.21□□□□□ -1.1
COPS3-202ENST00000417352 KLHDC9Q8NEP7 349 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 GMCL1Q96IK5 515 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 ZKSCAN3Q9BRR0 538 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 RWDD1Q9H446 243 aaPredicted RBP8.21□□□□□ -1.1
COPS3-202ENST00000417352 A1CFQ9NQ94 594 aaKnown RBP8.21□□□□□ -1.1
COPS3-202ENST00000417352 PDGFCQ9NRA1 345 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 HELLSQ9NRZ9 838 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 SYNPO2Q9UMS6 1093 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 LAMA3Q16787 3333 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 ELP1O95163 1332 aa8.21□□□□□ -1.1
COPS3-202ENST00000417352 A0A0D9SFI3 127 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 GRXCR1A8MXD5 290 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 MYL3P08590 195 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 TOP1P11387 765 aaKnown RBP8.2□□□□□ -1.1
COPS3-202ENST00000417352 SMPD1P17405 629 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 PTGS1P23219 599 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 MFAP1P55081 439 aaKnown RBP8.2□□□□□ -1.1
COPS3-202ENST00000417352 CCL23P55773 120 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 GJA9P57773 515 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 PSMC6P62333 389 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 PDE4DQ08499 809 aa8.2□□□□□ -1.1
COPS3-202ENST00000417352 NMIQ13287 307 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms