RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 CUL9Q8IWT3 2517 aa25.57■■□□□ 1.68
ACTB-203ENST00000417101 KDM4AO75164 1064 aa25.57■■□□□ 1.68
ACTB-203ENST00000417101 CD4P01730 458 aa25.57■■□□□ 1.68
ACTB-203ENST00000417101 PPIGQ13427 754 aaKnown RBP eCLIP25.57■■□□□ 1.68
ACTB-203ENST00000417101 ITGA7Q13683 1181 aa25.57■■□□□ 1.68
ACTB-203ENST00000417101 GPATCH4Q5T3I0 446 aaKnown RBP25.57■■□□□ 1.68
ACTB-203ENST00000417101 RNF207Q6ZRF8 634 aa25.57■■□□□ 1.68
ACTB-203ENST00000417101 DGKHQ86XP1 1220 aa25.57■■□□□ 1.68
ACTB-203ENST00000417101 SLC43A3Q8NBI5 491 aa25.57■■□□□ 1.68
ACTB-203ENST00000417101 WDR19Q8NEZ3 1342 aa25.57■■□□□ 1.68
ACTB-203ENST00000417101 CSF2RAP15509 400 aa25.56■■□□□ 1.68
ACTB-203ENST00000417101 DUSP28Q4G0W2 176 aa25.56■■□□□ 1.68
ACTB-203ENST00000417101 IQCA1Q86XH1 822 aa25.56■■□□□ 1.68
ACTB-203ENST00000417101 TMEM199Q8N511 208 aa25.56■■□□□ 1.68
ACTB-203ENST00000417101 WDR11Q9BZH6 1224 aa25.56■■□□□ 1.68
ACTB-203ENST00000417101 UBA5Q9GZZ9 404 aa25.56■■□□□ 1.68
ACTB-203ENST00000417101 CPVLQ9H3G5 476 aa25.56■■□□□ 1.68
ACTB-203ENST00000417101 GRIN2DO15399 1336 aa25.56■■□□□ 1.68
ACTB-203ENST00000417101 LOC102724159A0A0B4J2E5 919 aa25.55■■□□□ 1.68
ACTB-203ENST00000417101 B4E1Z4 1266 aa25.55■■□□□ 1.68
ACTB-203ENST00000417101 CYP2C18P33260 490 aa25.55■■□□□ 1.68
ACTB-203ENST00000417101 RPS6P62753 249 aaKnown RBP25.55■■□□□ 1.68
ACTB-203ENST00000417101 PWP2Q15269 919 aaKnown RBP25.55■■□□□ 1.68
ACTB-203ENST00000417101 C16orf59Q7L2K0 433 aa25.55■■□□□ 1.68
ACTB-203ENST00000417101 PNMA1Q8ND90 353 aa25.55■■□□□ 1.68
ACTB-203ENST00000417101 DSCC1Q9BVC3 393 aa25.55■■□□□ 1.68
ACTB-203ENST00000417101 NT5C2P49902 561 aa25.54■■□□□ 1.68
ACTB-203ENST00000417101 PSMC6P62333 389 aa25.54■■□□□ 1.68
ACTB-203ENST00000417101 USH1GQ495M9 461 aa25.54■■□□□ 1.68
ACTB-203ENST00000417101 CCDC178Q5BJE1 867 aa25.54■■□□□ 1.68
ACTB-203ENST00000417101 TMEM240Q5SV17 173 aa25.54■■□□□ 1.68
ACTB-203ENST00000417101 KAT14Q9H8E8 782 aa25.54■■□□□ 1.68
ACTB-203ENST00000417101 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.53■■□□□ 1.68
ACTB-203ENST00000417101 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.53■■□□□ 1.68
ACTB-203ENST00000417101 ACRP10323 421 aa25.53■■□□□ 1.68
ACTB-203ENST00000417101 PDE4DQ08499 809 aa25.53■■□□□ 1.68
ACTB-203ENST00000417101 IMMTQ16891 758 aaKnown RBP25.53■■□□□ 1.68
ACTB-203ENST00000417101 MYLIPQ8WY64 445 aa25.53■■□□□ 1.68
ACTB-203ENST00000417101 ZSCAN10Q96SZ4 725 aaPredicted RBP25.53■■□□□ 1.68
ACTB-203ENST00000417101 TRPV6Q9H1D0 765 aa25.53■■□□□ 1.68
ACTB-203ENST00000417101 PRUNE2Q8WUY3 3088 aa25.52■■□□□ 1.68
ACTB-203ENST00000417101 RBM47A0AV96 593 aaKnown RBP25.52■■□□□ 1.68
ACTB-203ENST00000417101 HIPK3Q9H422 1215 aa25.52■■□□□ 1.68
ACTB-203ENST00000417101 ZSWIM5Q9P217 1185 aa25.52■■□□□ 1.68
ACTB-203ENST00000417101 CTNNA3Q9UI47 895 aa25.52■■□□□ 1.68
ACTB-203ENST00000417101 LAMA4Q16363 1823 aa25.51■■□□□ 1.67
ACTB-203ENST00000417101 TMEM265A0A087WTH1 108 aa25.51■■□□□ 1.67
ACTB-203ENST00000417101 DNAJB2P25686 324 aa25.51■■□□□ 1.67
ACTB-203ENST00000417101 ZNF365Q70YC5 407 aa25.51■■□□□ 1.67
ACTB-203ENST00000417101 ENAHQ8N8S7 591 aaPredicted RBP25.51■■□□□ 1.67
ACTB-203ENST00000417101 DNERQ8NFT8 737 aa25.51■■□□□ 1.67
ACTB-203ENST00000417101 ANKS1AQ92625 1134 aa25.51■■□□□ 1.67
ACTB-203ENST00000417101 MPHOSPH6Q99547 160 aaKnown RBP25.51■■□□□ 1.67
ACTB-203ENST00000417101 SEZ6LQ9BYH1 1024 aa25.51■■□□□ 1.67
ACTB-203ENST00000417101 B4GALT4O60513 344 aa25.5■■□□□ 1.67
ACTB-203ENST00000417101 EDNRBP24530 442 aa25.5■■□□□ 1.67
ACTB-203ENST00000417101 CDC37Q16543 378 aaPredicted RBP25.5■■□□□ 1.67
ACTB-203ENST00000417101 UMODL1Q5DID0 1318 aa25.5■■□□□ 1.67
ACTB-203ENST00000417101 PSRC1Q6PGN9 363 aaPredicted RBP25.5■■□□□ 1.67
ACTB-203ENST00000417101 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.5■■□□□ 1.672e-12■■■□□ 15.3
ACTB-203ENST00000417101 OR6J1Q8NGC5 347 aa25.5■■□□□ 1.67
ACTB-203ENST00000417101 MAFAQ8NHW3 353 aaPredicted RBP25.5■■□□□ 1.67
ACTB-203ENST00000417101 POLR3EQ9NVU0 708 aa25.5■■□□□ 1.67
ACTB-203ENST00000417101 TNKSO95271 1327 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 MYL3P08590 195 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 CPT1AP50416 773 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 PPP2R5BQ15173 497 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 ASPRV1Q53RT3 343 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 RASIP1Q5U651 963 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 ADGRF4Q8IZF3 695 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 RGS22Q8NE09 1264 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 NOC4LQ9BVI4 516 aaKnown RBP25.49■■□□□ 1.67
ACTB-203ENST00000417101 KRT23Q9C075 422 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 IL25Q9H293 177 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 IL23AQ9NPF7 189 aa25.49■■□□□ 1.67
ACTB-203ENST00000417101 SUPT16HQ9Y5B9 1047 aaKnown RBP25.49■■□□□ 1.67
ACTB-203ENST00000417101 PDE4AP27815 886 aa25.48■■□□□ 1.67
ACTB-203ENST00000417101 CCL23P55773 120 aa25.48■■□□□ 1.67
ACTB-203ENST00000417101 PURAQ00577 322 aaKnown RBP25.48■■□□□ 1.67
ACTB-203ENST00000417101 SCFD2Q8WU76 684 aa25.48■■□□□ 1.67
ACTB-203ENST00000417101 UBAC1Q9BSL1 405 aa25.48■■□□□ 1.67
ACTB-203ENST00000417101 ALDH8A1Q9H2A2 487 aaPredicted RBP25.48■■□□□ 1.67
ACTB-203ENST00000417101 CNNM2Q9H8M5 875 aa25.48■■□□□ 1.67
ACTB-203ENST00000417101 GRXCR1A8MXD5 290 aa25.47■■□□□ 1.67
ACTB-203ENST00000417101 B4DLN1 442 aa25.47■■□□□ 1.67
ACTB-203ENST00000417101 DHX16O60231 1041 aaKnown RBP25.47■■□□□ 1.67
ACTB-203ENST00000417101 FOSL2P15408 326 aa25.47■■□□□ 1.67
ACTB-203ENST00000417101 MRPL12P52815 198 aaKnown RBP25.47■■□□□ 1.67
ACTB-203ENST00000417101 TBC1D5Q92609 795 aa25.47■■□□□ 1.67
ACTB-203ENST00000417101 TIFAQ96CG3 184 aa25.47■■□□□ 1.67
ACTB-203ENST00000417101 GPHNQ9NQX3 736 aaPredicted RBP25.47■■□□□ 1.67
ACTB-203ENST00000417101 ABCB11O95342 1321 aa25.46■■□□□ 1.67
ACTB-203ENST00000417101 NKRFO15226 690 aaKnown RBP eCLIP25.46■■□□□ 1.67
ACTB-203ENST00000417101 PARP1P09874 1014 aaKnown RBP25.46■■□□□ 1.67
ACTB-203ENST00000417101 GSPT1P15170 499 aaKnown RBP25.46■■□□□ 1.67
ACTB-203ENST00000417101 GRIN2CQ14957 1233 aa25.46■■□□□ 1.67
ACTB-203ENST00000417101 QRICH1Q2TAL8 776 aa25.46■■□□□ 1.67
ACTB-203ENST00000417101 BRDTQ58F21 947 aaPredicted RBP25.46■■□□□ 1.67
ACTB-203ENST00000417101 COPS5Q92905 334 aa25.46■■□□□ 1.67
ACTB-203ENST00000417101 MTG1Q9BT17 334 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms