RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 C17orf99Q6UX52 265 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 SLC30A10Q6XR72 485 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 DNAJC5GQ8N7S2 189 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 CHAMP1Q96JM3 812 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 PGBD1Q96JS3 809 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 PURBQ96QR8 312 aaKnown RBP9.29□□□□□ -0.92
MDC1-203ENST00000417033 PHF20Q9BVI0 1012 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 TEX13BQ9BXU2 312 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 ZCCHC17Q9NP64 241 aaKnown RBP9.29□□□□□ -0.92
MDC1-203ENST00000417033 TMEM260Q9NX78 707 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 MORF4L1Q9UBU8 362 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 MTMR6Q9Y217 621 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 ZDHHC9Q9Y397 364 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 RABGAP1Q9Y3P9 1069 aa9.29□□□□□ -0.92
MDC1-203ENST00000417033 VPS37CA5D8V6 355 aaPredicted RBP9.28□□□□□ -0.92
MDC1-203ENST00000417033 SMCO2A6NFE2 343 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 TLR2O60603 784 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 HOXA13P31271 388 aaPredicted RBP9.28□□□□□ -0.92
MDC1-203ENST00000417033 OAZ1P54368 228 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 NLRP5P59047 1200 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 NR5A1Q13285 461 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 FAM110CQ1W6H9 321 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 EARS2Q5JPH6 523 aaKnown RBP9.28□□□□□ -0.92
MDC1-203ENST00000417033 LARP1BQ659C4 914 aaKnown RBP9.28□□□□□ -0.92
MDC1-203ENST00000417033 USP17L6PQ6QN14 398 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 FERMT3Q86UX7 667 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 NCAPG2Q86XI2 1143 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 RIOX2Q8IUF8 465 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 MB21D1Q8N884 522 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 FBXO18Q8NFZ0 1043 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 TRERF1Q96PN7 1200 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 ARHGAP39Q9C0H5 1083 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 ZFYVE28Q9HCC9 887 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 COL20A1Q9P218 1284 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 RBM27Q9P2N5 1060 aaKnown RBP9.28□□□□□ -0.92
MDC1-203ENST00000417033 DDX49Q9Y6V7 483 aaKnown RBP9.28□□□□□ -0.92
MDC1-203ENST00000417033 ABCB11O95342 1321 aa9.28□□□□□ -0.92
MDC1-203ENST00000417033 ESYT2A0FGR8 921 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 BTBD18B2RXH4 712 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 MEIS2O14770 477 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 MMP1P03956 469 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 FDX1P10109 184 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 GCLCP48506 637 aaPredicted RBP9.27□□□□□ -0.93
MDC1-203ENST00000417033 ADCY7P51828 1080 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 RESTQ13127 1097 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 WDR78Q5VTH9 848 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 JAKMIP3Q5VZ66 844 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 PPP1R18Q6NYC8 613 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 NSMFQ6X4W1 530 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 DIS3L2Q8IYB7 885 aaKnown RBP9.27□□□□□ -0.93
MDC1-203ENST00000417033 GPRC5AQ8NFJ5 357 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 GTF3C2Q8WUA4 911 aaPredicted RBP9.27□□□□□ -0.93
MDC1-203ENST00000417033 WASF1Q92558 559 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 TNFRSF25Q93038 417 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 ZMYND12Q9H0C1 365 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 A1CFQ9NQ94 594 aaKnown RBP9.27□□□□□ -0.93
MDC1-203ENST00000417033 SH3GLB2Q9NR46 395 aa9.27□□□□□ -0.93
MDC1-203ENST00000417033 BIN2Q9UBW5 565 aaPredicted RBP9.27□□□□□ -0.93
MDC1-203ENST00000417033 COLQQ9Y215 455 aaPredicted RBP9.27□□□□□ -0.93
MDC1-203ENST00000417033 hCG_1984214I3L0E3 225 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 M0R2N6 131 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 WNT7AO00755 349 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 STX6O43752 255 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 CFBP00751 764 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 BAATQ14032 418 aaPredicted RBP9.26□□□□□ -0.93
MDC1-203ENST00000417033 FAM173BQ6P4H8 233 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 FCHSD1Q86WN1 690 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 BLIDQ8IZY5 108 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 ZNF713Q8N859 430 aaPredicted RBP9.26□□□□□ -0.93
MDC1-203ENST00000417033 DAGLBQ8NCG7 672 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 CCDC148Q8NFR7 591 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 FGD4Q96M96 766 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 ACAD9Q9H845 621 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 PSTPIP2Q9H939 334 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 RIC8AQ9NPQ8 531 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 WDR70Q9NW82 654 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 DAXXQ9UER7 740 aaPredicted RBP9.26□□□□□ -0.93
MDC1-203ENST00000417033 PCDHA6Q9UN73 950 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 PCDHA4Q9UN74 947 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 MRPL11Q9Y3B7 192 aaKnown RBP9.26□□□□□ -0.93
MDC1-203ENST00000417033 PCDHA8Q9Y5H6 950 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 ASTN1O14525 1302 aa9.26□□□□□ -0.93
MDC1-203ENST00000417033 LCTP09848 1927 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 H3BQV1 296 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 EDIL3O43854 480 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 BRD1O95696 1058 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 ALDH1A1P00352 501 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 PGK2P07205 417 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 CALML3P27482 149 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 KRT2P35908 639 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 CLK2P49760 499 aaKnown RBP9.25□□□□□ -0.93
MDC1-203ENST00000417033 HSD17B4P51659 736 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 RPS6P62753 249 aaKnown RBP9.25□□□□□ -0.93
MDC1-203ENST00000417033 UBXN2AP68543 259 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 CNTN2Q02246 1040 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 TRIM29Q14134 588 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 NBR1Q14596 966 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 TKFCQ3LXA3 575 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 MCTP1Q6DN14 999 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 GPR142Q7Z601 462 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms