RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 ULK1O75385 1050 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 B3GALNT1O75752 331 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 DNAJC8O75937 253 aaPredicted RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 KIAA0754O94854 1291 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 MT-CO1P00395 513 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 PARP1P09874 1014 aaKnown RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 JMJD7P0C870 316 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 MUTP22033 750 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 IGFALSP35858 605 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 PRPHP41219 470 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 KCNJ6P48051 423 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 CD151P48509 253 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 TRPC1P48995 793 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 UBASH3AP57075 661 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 CALD1Q05682 793 aaKnown RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 KLF1Q13351 362 aaPredicted RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 SPARCL1Q14515 664 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 MTFR1Q15390 333 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 CTC1Q2NKJ3 1217 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 PLA2G4EQ3MJ16 856 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 TUBB8Q3ZCM7 444 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 SLC45A4Q5BKX6 768 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 TRIM61Q5EBN2 209 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 FAM209AQ5JX71 171 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 FKBP15Q5T1M5 1219 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 LRCH2Q5VUJ6 765 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 CCDC30Q5VVM6 783 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 TAF3Q5VWG9 929 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 CDCA2Q69YH5 1023 aaPredicted RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 TTBK2Q6IQ55 1244 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 PGBD2Q6P3X8 592 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 C16orf87Q6PH81 154 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 BLOC1S3Q6QNY0 202 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 THSD4Q6ZMP0 1018 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 CCDC149Q6ZUS6 474 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 RFX8Q6ZV50 586 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 KDELC2Q7Z4H8 507 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 REC114Q7Z4M0 266 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 VSIG1Q86XK7 387 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 MAP4K3Q8IVH8 894 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 CMTR2Q8IYT2 770 aaKnown RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 MICALL1Q8N3F8 863 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 MRPL50Q8N5N7 158 aaKnown RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 TRIML1Q8N9V2 468 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 AHCYL2Q96HN2 611 aaKnown RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 RADILQ96JH8 1075 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 NCAPGQ9BPX3 1015 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 TTLL2Q9BWV7 592 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 OXCT2Q9BYC2 517 aaPredicted RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 GTPBP4Q9BZE4 634 aaKnown RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 VPS11Q9H270 941 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 PHAXQ9H814 394 aaKnown RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 BRMS1Q9HCU9 246 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 AAASQ9NRG9 546 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 WDR35Q9P2L0 1181 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 GIMAP2Q9UG22 337 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 TBK1Q9UHD2 729 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 HERC5Q9UII4 1024 aaKnown RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 ZNF232Q9UNY5 417 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 JAG2Q9Y219 1238 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 KNSTRNQ9Y448 316 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 PCDHB3Q9Y5E6 796 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 SYNJ2BP-COX16A0A087WUM0 186 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 IPO8O15397 1037 aaKnown RBP3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 IRAK2O43187 625 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 ACTN4O43707 911 aaKnown RBP3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 AP1G1O43747 822 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 RNF40O75150 1001 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 MAFO75444 373 aaPredicted RBP3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 PRKD3O94806 890 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 TPPPO94811 219 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 F13A1P00488 732 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 GNRH1P01148 92 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 KRT1P04264 644 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 DHRS4L1P0CG22 281 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 KRT10P13645 584 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 TFE3P19532 575 aaPredicted RBP3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 GUCY2CP25092 1073 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 HSPA4P34932 840 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 IARSP41252 1262 aaKnown RBP3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 NPTX2P47972 431 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 MAN2A2P49641 1150 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 PTPN5P54829 565 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 NRLP54845 237 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 CSE1LP55060 971 aaKnown RBP3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 EVCP57679 992 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 IL2P60568 153 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 ERVK-9P63128 1117 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 OCRLQ01968 901 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 CENPCQ03188 943 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 LRRC74AQ0VAA2 488 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 COX10Q12887 443 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 MLECQ14165 292 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 TAF7Q15545 349 aaPredicted RBP3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 RRP12Q5JTH9 1297 aaKnown RBP3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 FOXB2Q5VYV0 432 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 TRIM68Q6AZZ1 485 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 PGM2L1Q6PCE3 622 aa3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 DARS2Q6PI48 645 aaKnown RBP3.57□□□□□ -1.84
CTDSPL-203ENST00000416688 TPTE2Q6XPS3 522 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms