RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 ZNF408Q9H9D4 720 aa14.89□□□□□ -0.03
HNF4A-204ENST00000415691 POLR3EQ9NVU0 708 aa14.89□□□□□ -0.03
HNF4A-204ENST00000415691 TUBE1Q9UJT0 475 aa14.89□□□□□ -0.03
HNF4A-204ENST00000415691 ZNF112Q9UJU3 913 aa14.89□□□□□ -0.03
HNF4A-204ENST00000415691 CEP83Q9Y592 693 aa14.89□□□□□ -0.03
HNF4A-204ENST00000415691 PDIA3P30101 505 aaKnown RBP14.88□□□□□ -0.03
HNF4A-204ENST00000415691 ATP2B2Q01814 1243 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 MCM6Q14566 821 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 ERCC4Q92889 916 aaPredicted RBP14.88□□□□□ -0.03
HNF4A-204ENST00000415691 KLRG1Q96E93 195 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 TMEM47Q9BQJ4 181 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 VIPAS39Q9H9C1 493 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 CABP5Q9NP86 173 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 TAOK2Q9UL54 1235 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 A0A1B0GVL5 298 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 PTPDC1A2A3K4 754 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 SERPINC1P01008 464 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 CCT2P78371 535 aaKnown RBP14.88□□□□□ -0.03
HNF4A-204ENST00000415691 TMEM179Q6ZVK1 233 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 DGKHQ86XP1 1220 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 HOOK2Q96ED9 719 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 MTA3Q9BTC8 594 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 CDC23Q9UJX2 597 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 ZBTB21Q9ULJ3 1066 aa14.88□□□□□ -0.03
HNF4A-204ENST00000415691 KIF3CO14782 793 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 ATP1A3P13637 1013 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 EEF2P13639 858 aaKnown RBP14.87□□□□□ -0.03
HNF4A-204ENST00000415691 SGMS1Q86VZ5 419 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 ANKS1AQ92625 1134 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 DONSONQ9NYP3 566 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 HPS5Q9UPZ3 1129 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 MTMR7Q9Y216 660 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 CTNND1O60716 968 aaKnown RBP14.87□□□□□ -0.03
HNF4A-204ENST00000415691 CTDNEP1O95476 244 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 ITGBL1O95965 494 aaPredicted RBP14.87□□□□□ -0.03
HNF4A-204ENST00000415691 USP8P40818 1118 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 NOVP48745 357 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 AARSP49588 968 aaKnown RBP eCLIP14.87□□□□□ -0.03
HNF4A-204ENST00000415691 CHADLQ6NUI6 762 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 APOA5Q6Q788 366 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 CNNM3Q8NE01 707 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 TACO1Q9BSH4 297 aaKnown RBP14.87□□□□□ -0.03
HNF4A-204ENST00000415691 CXorf56Q9H5V9 222 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 NCOA5Q9HCD5 579 aaKnown RBP14.87□□□□□ -0.03
HNF4A-204ENST00000415691 SLC12A7Q9Y666 1083 aa14.87□□□□□ -0.03
HNF4A-204ENST00000415691 PLIN4Q96Q06 1357 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 CCDC196A0A1B0GTZ2 297 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 A0A1W2PRG0 241 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 ZNF202O95125 648 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 NT5C2P49902 561 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 TTLL12Q14166 644 aaPredicted RBP14.86□□□□□ -0.03
HNF4A-204ENST00000415691 CASP8Q14790 479 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 RASGRP2Q7LDG7 609 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 LRRC47Q8N1G4 583 aaKnown RBP14.86□□□□□ -0.03
HNF4A-204ENST00000415691 TMTC2Q8N394 836 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 ACER1Q8TDN7 264 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 ZNF274Q96GC6 653 aaPredicted RBP14.86□□□□□ -0.03
HNF4A-204ENST00000415691 KANSL2Q9H9L4 492 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 PPP1R12BO60237 982 aaPredicted RBP14.86□□□□□ -0.03
HNF4A-204ENST00000415691 TTLL1O95922 423 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 CMA1P23946 247 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 YY1P25490 414 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 ECE1P42892 770 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.86□□□□□ -0.03
HNF4A-204ENST00000415691 MICU3Q86XE3 530 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 ZNF654Q8IZM8 581 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.86□□□□□ -0.036e-7■■■■■ 42.5
HNF4A-204ENST00000415691 CTCFLQ8NI51 663 aaPredicted RBP14.86□□□□□ -0.03
HNF4A-204ENST00000415691 CCDC12Q8WUD4 166 aaPredicted RBP14.86□□□□□ -0.03
HNF4A-204ENST00000415691 NUP133Q8WUM0 1156 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 KAT14Q9H8E8 782 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 ABCB6Q9NP58 842 aa14.86□□□□□ -0.03
HNF4A-204ENST00000415691 GOLGA8BA8MQT2 603 aa14.85□□□□□ -0.03
HNF4A-204ENST00000415691 UBE2Q2LH0YL09 131 aa14.85□□□□□ -0.03
HNF4A-204ENST00000415691 PPFIA3O75145 1194 aa14.85□□□□□ -0.03
HNF4A-204ENST00000415691 NF2P35240 595 aa14.85□□□□□ -0.03
HNF4A-204ENST00000415691 ICA1Q05084 483 aa14.85□□□□□ -0.03
HNF4A-204ENST00000415691 STK38Q15208 465 aa14.85□□□□□ -0.03
HNF4A-204ENST00000415691 CCDC178Q5BJE1 867 aa14.85□□□□□ -0.03
HNF4A-204ENST00000415691 FAM177A1Q8N128 213 aaPredicted RBP14.85□□□□□ -0.03
HNF4A-204ENST00000415691 PNMA1Q8ND90 353 aa14.85□□□□□ -0.03
HNF4A-204ENST00000415691 ZBTB43O43298 467 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 ASNSP08243 561 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 TROAPQ12815 778 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 SF3A1Q15459 793 aaKnown RBP14.84□□□□□ -0.03
HNF4A-204ENST00000415691 PNKPQ96T60 521 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 FAM217BQ9NTX9 383 aaPredicted RBP14.84□□□□□ -0.03
HNF4A-204ENST00000415691 SPTLC2O15270 562 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 N4BP1O75113 896 aaKnown RBP14.84□□□□□ -0.03
HNF4A-204ENST00000415691 CDC27P30260 824 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 VGLL4Q14135 290 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 WDR93Q6P2C0 686 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 CATIPQ7Z7H3 387 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 SCYL3Q8IZE3 742 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 TC2NQ8N9U0 490 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 CLMNQ96JQ2 1002 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 NYAP2Q9P242 653 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 MYH8P13535 1937 aa14.84□□□□□ -0.03
HNF4A-204ENST00000415691 BIN1O00499 593 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms