RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 CCNT1O60563 726 aaKnown RBP20.08■□□□□ 0.8
SCARB1-203ENST00000415380 PLEKP08567 350 aaPredicted RBP20.08■□□□□ 0.8
SCARB1-203ENST00000415380 TSPY3P0CV98 308 aa20.08■□□□□ 0.8
SCARB1-203ENST00000415380 TSPY8P0CW00 308 aa20.08■□□□□ 0.8
SCARB1-203ENST00000415380 LETM2Q2VYF4 491 aa20.08■□□□□ 0.8
SCARB1-203ENST00000415380 SLC10A5Q5PT55 438 aa20.08■□□□□ 0.8
SCARB1-203ENST00000415380 KRT26Q7Z3Y9 468 aa20.08■□□□□ 0.8
SCARB1-203ENST00000415380 GOLGA6L1Q8N7Z2 621 aa20.08■□□□□ 0.8
SCARB1-203ENST00000415380 RIN2Q8WYP3 895 aaPredicted RBP20.08■□□□□ 0.8
SCARB1-203ENST00000415380 COL16A1Q07092 1604 aaPredicted RBP20.07■□□□□ 0.8
SCARB1-203ENST00000415380 PALM3A6NDB9 673 aaPredicted RBP20.07■□□□□ 0.8
SCARB1-203ENST00000415380 GOLGA8HP0CJ92 632 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 SMCR8Q8TEV9 937 aaPredicted RBP20.07■□□□□ 0.8
SCARB1-203ENST00000415380 HPS3Q969F9 1004 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 CCDC42Q96M95 316 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 ROBO1Q9Y6N7 1651 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 MYH1P12882 1939 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 FKBP15Q5T1M5 1219 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 SH3RF3Q8TEJ3 882 aaPredicted RBP20.07■□□□□ 0.8
SCARB1-203ENST00000415380 TMEM47Q9BQJ4 181 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 SELENOOQ9BVL4 669 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 CDCA7Q9BWT1 371 aaPredicted RBP20.07■□□□□ 0.8
SCARB1-203ENST00000415380 TRIM34Q9BYJ4 488 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 TSGA10Q9BZW7 698 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 ANKRD2Q9GZV1 360 aa20.07■□□□□ 0.8
SCARB1-203ENST00000415380 SPA17Q15506 151 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 TBC1D9BQ66K14 1250 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 SLC44A5Q8NCS7 719 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 KIAA0895Q8NCT3 520 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 ZMYND12Q9H0C1 365 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 CPVLQ9H3G5 476 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 SEMA6BQ9H3T3 888 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 STX8Q9UNK0 236 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 CCDC88AQ3V6T2 1871 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 GGCXP38435 758 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 PPP1R2P41236 205 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 CCDC96Q2M329 555 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 SNX12Q9UMY4 172 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 ROBO3Q96MS0 1386 aa20.06■□□□□ 0.8
SCARB1-203ENST00000415380 TECP42680 631 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 NT5C2P49902 561 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 NAPAP54920 295 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 SPTY2D1Q68D10 685 aaPredicted RBP20.05■□□□□ 0.8
SCARB1-203ENST00000415380 IQCEQ6IPM2 695 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 KRT25Q7Z3Z0 450 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 CREG2Q8IUH2 290 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 ZNF444Q8N0Y2 327 aaPredicted RBP20.05■□□□□ 0.8
SCARB1-203ENST00000415380 FNBP4Q8N3X1 1017 aaPredicted RBP20.05■□□□□ 0.8
SCARB1-203ENST00000415380 CRACR2AQ9BSW2 395 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 CAPN6Q9Y6Q1 641 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 STRCQ7RTU9 1775 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 KLRF2D3W0D1 207 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 NONOQ15233 471 aaKnown RBP eCLIP20.05■□□□□ 0.82e-6■■■□□ 17.2
SCARB1-203ENST00000415380 CNNM4Q6P4Q7 775 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 SMIM5Q71RC9 77 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 MMTAG2Q9BU76 263 aaKnown RBP20.05■□□□□ 0.8
SCARB1-203ENST00000415380 ARHGAP20Q9P2F6 1191 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 PLAGL2Q9UPG8 496 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 JRKLQ9Y4A0 524 aa20.05■□□□□ 0.8
SCARB1-203ENST00000415380 AGPSO00116 658 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 HNRNPH3P31942 346 aaKnown RBP20.04■□□□□ 0.8
SCARB1-203ENST00000415380 AMPD3Q01432 767 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 LINC00116Q8NCU8 138 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 TRIM58Q8NG06 486 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 SLC39A2Q9NP94 309 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 EPHB6O15197 1021 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 COBLL1Q53SF7 1204 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 HINFPQ9BQA5 517 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 LZTS2Q9BRK4 669 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 IFIH1Q9BYX4 1025 aaKnown RBP20.04■□□□□ 0.8
SCARB1-203ENST00000415380 SH2D4AQ9H788 454 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 MLXIPQ9HAP2 919 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 PCDHA13Q9Y5I0 950 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 SPATA31A1Q5TZJ5 1347 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 SMCO2A6NFE2 343 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 USO1O60763 962 aaKnown RBP20.04■□□□□ 0.8
SCARB1-203ENST00000415380 VWA3BQ502W6 1294 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 CENPPQ6IPU0 288 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 C2CD5Q86YS7 1000 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 NLRP3Q96P20 1036 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 RSPH14Q9UHP6 348 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 SIK3Q9Y2K2 1263 aa20.04■□□□□ 0.8
SCARB1-203ENST00000415380 KCNQ2O43526 872 aa20.03■□□□□ 0.8
SCARB1-203ENST00000415380 TACC1O75410 805 aa20.03■□□□□ 0.8
SCARB1-203ENST00000415380 NEK8Q86SG6 692 aa20.03■□□□□ 0.8
SCARB1-203ENST00000415380 MMGT1Q8N4V1 131 aa20.03■□□□□ 0.8
SCARB1-203ENST00000415380 AENQ8WTP8 325 aaKnown RBP20.03■□□□□ 0.8
SCARB1-203ENST00000415380 IQCDQ96DY2 449 aa20.03■□□□□ 0.8
SCARB1-203ENST00000415380 DRC1Q96MC2 740 aa20.03■□□□□ 0.8
SCARB1-203ENST00000415380 COL5A3P25940 1745 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-203ENST00000415380 MOCS3O95396 460 aa20.03■□□□□ 0.8
SCARB1-203ENST00000415380 EZH2Q15910 746 aaKnown RBP20.03■□□□□ 0.8
SCARB1-203ENST00000415380 CCDC24Q8N4L8 307 aa20.03■□□□□ 0.8
SCARB1-203ENST00000415380 SMARCC1Q92922 1105 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-203ENST00000415380 SPZ1Q9BXG8 430 aa20.03■□□□□ 0.8
SCARB1-203ENST00000415380 PLEKHA4Q9H4M7 779 aa20.03■□□□□ 0.8
SCARB1-203ENST00000415380 FAM207AQ9NSI2 230 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-203ENST00000415380 IRS2Q9Y4H2 1338 aa20.02■□□□□ 0.8
SCARB1-203ENST00000415380 LDHBP07195 334 aaKnown RBP20.02■□□□□ 0.8
SCARB1-203ENST00000415380 RASA1P20936 1047 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms