RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SMCR8Q8TEV9 937 aaPredicted RBP10.92□□□□□ -0.66
CD44-206ENST00000415148 GPKOWQ92917 476 aaPredicted RBP eCLIP10.92□□□□□ -0.66
CD44-206ENST00000415148 NLRP3Q96P20 1036 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 AGPAT5Q9NUQ2 364 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 FLT1P17948 1338 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 PES1O00541 588 aaKnown RBP10.92□□□□□ -0.66
CD44-206ENST00000415148 USP17L8P0C7I0 530 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 PRDX5P30044 214 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 GGCXP38435 758 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 GSTO1P78417 241 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 INF2Q27J81 1249 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 ZNF444Q8N0Y2 327 aaPredicted RBP10.92□□□□□ -0.66
CD44-206ENST00000415148 HDAC7Q8WUI4 952 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 SPZ1Q9BXG8 430 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 TRIM9Q9C026 710 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 MKNK2Q9HBH9 465 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 ZNF287Q9HBT7 754 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 SMARCAL1Q9NZC9 954 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 ABCB11O95342 1321 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 TAF1P21675 1872 aa10.92□□□□□ -0.66
CD44-206ENST00000415148 OR52Z1P0C646 297 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 GNA11P29992 359 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 VAV2P52735 878 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 PPP4CP60510 307 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 CYP27A1Q02318 531 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 PDE4DQ08499 809 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 C2orf54Q08AI8 447 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 KIF5AQ12840 1032 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 FKBP15Q5T1M5 1219 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 ANKRD40Q6AI12 368 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 CNNM4Q6P4Q7 775 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 ZNF572Q7Z3I7 529 aaPredicted RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 DZIP1Q86YF9 867 aaKnown RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 FNBP4Q8N3X1 1017 aaPredicted RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 MARCH10Q8NA82 808 aaPredicted RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 RASGRP4Q8TDF6 673 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 ACSBG1Q96GR2 724 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 NUTM2BA6NNL0 878 aaPredicted RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 NUTM2EB1AL46 878 aaPredicted RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 CYTH3O43739 400 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 USO1O60763 962 aaKnown RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 FGFR1OPO95684 399 aaKnown RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 BAG3O95817 575 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 TSPY3P0CV98 308 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 TSPY8P0CW00 308 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 PLCG1P19174 1290 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 SPA17Q15506 151 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 MIIPQ5JXC2 388 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 CCDC70Q6NSX1 233 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 FOXR2Q6PJQ5 311 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 GOLGA6L1Q8N7Z2 621 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 TRIM58Q8NG06 486 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 WDR66Q8TBY9 1149 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 COG1Q8WTW3 980 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 RRP36Q96EU6 259 aaKnown RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 CNOT6LQ96LI5 555 aaKnown RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 NOC4LQ9BVI4 516 aaKnown RBP10.91□□□□□ -0.66
CD44-206ENST00000415148 MYH1P12882 1939 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 IRS2Q9Y4H2 1338 aa10.91□□□□□ -0.66
CD44-206ENST00000415148 PVALEFA0A1B0GWK0 134 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 LCA5LO95447 670 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 MTIF2P46199 727 aaKnown RBP10.9□□□□□ -0.66
CD44-206ENST00000415148 NONOQ15233 471 aaKnown RBP eCLIP10.9□□□□□ -0.66
CD44-206ENST00000415148 SLC4A8Q2Y0W8 1093 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 TTC19Q6DKK2 380 aaPredicted RBP10.9□□□□□ -0.66
CD44-206ENST00000415148 CENPPQ6IPU0 288 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 CCNI2Q6ZMN8 369 aaPredicted RBP10.9□□□□□ -0.66
CD44-206ENST00000415148 ARHGAP27Q6ZUM4 889 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 HEATR3Q7Z4Q2 680 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 C6orf50Q9HD87 102 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 TFCP2L1Q9NZI6 479 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 EHD2Q9NZN4 543 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 PLAGL2Q9UPG8 496 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 JRKLQ9Y4A0 524 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 ZNF263O14978 683 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 LDHCP07864 332 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 PLEKP08567 350 aaPredicted RBP10.9□□□□□ -0.66
CD44-206ENST00000415148 KLRK1P26718 216 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 TXNRD1Q16881 649 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 SLC35G1Q2M3R5 365 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 KRT26Q7Z3Y9 468 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 MMGT1Q8N4V1 131 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 AFAP1L1Q8TED9 768 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 SECISBP2LQ93073 1101 aaKnown RBP10.9□□□□□ -0.66
CD44-206ENST00000415148 CALML4Q96GE6 196 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 CCDC42Q96M95 316 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 TMEM47Q9BQJ4 181 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 EDEM3Q9BZQ6 932 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 POLD4Q9HCU8 107 aa10.9□□□□□ -0.66
CD44-206ENST00000415148 MYH10P35580 1976 aa10.9□□□□□ -0.67
CD44-206ENST00000415148 CNTNAP4Q9C0A0 1308 aa10.89□□□□□ -0.67
CD44-206ENST00000415148 MACROD2A1Z1Q3 448 aa10.89□□□□□ -0.67
CD44-206ENST00000415148 KLRF2D3W0D1 207 aa10.89□□□□□ -0.67
CD44-206ENST00000415148 LDHBP07195 334 aaKnown RBP10.89□□□□□ -0.67
CD44-206ENST00000415148 CORO7P57737 925 aa10.89□□□□□ -0.67
CD44-206ENST00000415148 STK4Q13043 487 aa10.89□□□□□ -0.67
CD44-206ENST00000415148 NEK8Q86SG6 692 aa10.89□□□□□ -0.67
CD44-206ENST00000415148 CCDC84Q86UT8 332 aaPredicted RBP10.89□□□□□ -0.67
CD44-206ENST00000415148 SELENOOQ9BVL4 669 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms