RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 GPRASP2Q96D09 838 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 ZSCAN31Q96LW9 406 aaPredicted RBP10.57□□□□□ -0.72
SNHG3-201ENST00000413987 YY1AP1Q9H869 796 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 EFCC1Q9HA90 598 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 KCND1Q9NSA2 647 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 DDX19AQ9NUU7 478 aaKnown RBP10.57□□□□□ -0.72
SNHG3-201ENST00000413987 ANKIB1Q9P2G1 1089 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 CLIP2Q9UDT6 1046 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 C19orf81C9J6K1 198 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 RASGRP1O95267 797 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 TUBB4AP04350 444 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 PMLP29590 882 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 KRT85P78386 507 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 NAA30Q147X3 362 aaPredicted RBP10.56□□□□□ -0.72
SNHG3-201ENST00000413987 FBXO38Q6PIJ6 1188 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 LVRNQ6Q4G3 990 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 ZFPM2Q8WW38 1151 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 VMP1Q96GC9 406 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 FAM210AQ96ND0 272 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 SEC62Q99442 399 aaKnown RBP10.56□□□□□ -0.72
SNHG3-201ENST00000413987 HAUS7Q99871 368 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 BRIP1Q9BX63 1249 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 CBX8Q9HC52 389 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 ZNF215Q9UL58 517 aaPredicted RBP10.56□□□□□ -0.72
SNHG3-201ENST00000413987 A0A0D9SFI3 127 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 NBNO60934 754 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 CAPN2P17655 700 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 DNM1Q05193 864 aaKnown RBP10.56□□□□□ -0.72
SNHG3-201ENST00000413987 RASGRF1Q13972 1273 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 LUZP1Q86V48 1076 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 TNMDQ9H2S6 317 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 SUDS3Q9H7L9 328 aaPredicted RBP10.56□□□□□ -0.72
SNHG3-201ENST00000413987 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
SNHG3-201ENST00000413987 RASSF10A6NK89 507 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 KLF4O43474 513 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 COQ9O75208 318 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 SLC5A1P13866 664 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 HTR3AP46098 478 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 TPM4P67936 248 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 EHHADHQ08426 723 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 SQSTM1Q13501 440 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 TRIM29Q14134 588 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 KIAA1614Q5VZ46 1190 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 CCDC129Q6ZRS4 1044 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 DGKHQ86XP1 1220 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 C2CD5Q86YS7 1000 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 TXLNBQ8N3L3 684 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 CACTINQ8WUQ7 758 aaKnown RBP10.55□□□□□ -0.72
SNHG3-201ENST00000413987 RBM17Q96I25 401 aaKnown RBP10.55□□□□□ -0.72
SNHG3-201ENST00000413987 SH2B1Q9NRF2 756 aaPredicted RBP10.55□□□□□ -0.72
SNHG3-201ENST00000413987 MTMR6Q9Y217 621 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 RAD50Q92878 1312 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 QSER1Q2KHR3 1735 aa10.55□□□□□ -0.72
SNHG3-201ENST00000413987 MYO5AQ9Y4I1 1855 aaKnown RBP10.54□□□□□ -0.72
SNHG3-201ENST00000413987 KLRG2A4D1S0 409 aaPredicted RBP10.54□□□□□ -0.72
SNHG3-201ENST00000413987 CTSHP09668 335 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 HMGB2P26583 209 aaKnown RBP10.54□□□□□ -0.72
SNHG3-201ENST00000413987 GJA5P36382 358 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 ETFBP38117 255 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 PLCB3Q01970 1234 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 NMIQ13287 307 aaPredicted RBP10.54□□□□□ -0.72
SNHG3-201ENST00000413987 ANO6Q4KMQ2 910 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 SARM1Q6SZW1 724 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 RBM43Q6ZSC3 357 aaKnown RBP10.54□□□□□ -0.72
SNHG3-201ENST00000413987 LRRC8AQ8IWT6 810 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 CRELD1Q96HD1 420 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 PCDH10Q9P2E7 1040 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 COL1A1P02452 1464 aaPredicted RBP10.54□□□□□ -0.72
SNHG3-201ENST00000413987 AK2P54819 239 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 HNRNPH2P55795 449 aaKnown RBP10.54□□□□□ -0.72
SNHG3-201ENST00000413987 SNX16P57768 344 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 NCOA4Q13772 614 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 MUM1L1Q5H9M0 696 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 ZNF589Q86UQ0 364 aaPredicted RBP10.54□□□□□ -0.72
SNHG3-201ENST00000413987 FLCNQ8NFG4 579 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.54□□□□□ -0.72
SNHG3-201ENST00000413987 HMG20BQ9P0W2 317 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 IKBKGQ9Y6K9 419 aa10.54□□□□□ -0.72
SNHG3-201ENST00000413987 ARAP2Q8WZ64 1704 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 A0A0G2JLW4 131 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 GOLGA6L4A6NEF3 574 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 PPEF1O14829 653 aaPredicted RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 ATP8B1O43520 1251 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 H2AFXP16104 143 aaPredicted RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 GJB2P29033 226 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 ELF2Q15723 593 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 CTR9Q6PD62 1173 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 SAMD14Q8IZD0 417 aaPredicted RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 SIX5Q8N196 739 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 ZNF713Q8N859 430 aaPredicted RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 FAM174AQ8TBP5 190 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 SCAND2PQ9GZW5 306 aaPredicted RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 CSRNP2Q9H175 543 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 PIH1D3Q9NQM4 214 aaKnown RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 ARGLU1Q9NWB6 273 aaPredicted RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 AKAP11Q9UKA4 1901 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 ZNF804BA4D1E1 1349 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 FAM170AA1A519 330 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 GOLGA6L19H0YKK7 550 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 PRPF3O43395 683 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms