RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 PTPREP23469 700 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 ADCYAP1R1P41586 468 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 ATP2B2Q01814 1243 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 TLE2Q04725 743 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 PDE4BQ07343 736 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 TRIM29Q14134 588 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 KRT40Q6A162 431 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 ARRDC4Q8NCT1 418 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 KCNG4Q8TDN1 519 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 FERMT2Q96AC1 680 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 NECAB3Q96P71 396 aaPredicted RBP19.65■□□□□ 0.74
PTPRC-206ENST00000413409 ZKSCAN3Q9BRR0 538 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 EMILIN3Q9NT22 766 aa19.65■□□□□ 0.74
PTPRC-206ENST00000413409 RBM28Q9NW13 759 aaKnown RBP19.65■□□□□ 0.74
PTPRC-206ENST00000413409 MYO9BQ13459 2157 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.64■□□□□ 0.73
PTPRC-206ENST00000413409 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.64■□□□□ 0.73
PTPRC-206ENST00000413409 SLC15A5A6NIM6 579 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 C19orf81C9J6K1 198 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 PPFIA3O75145 1194 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 MRPS5P82675 430 aaKnown RBP19.64■□□□□ 0.73
PTPRC-206ENST00000413409 AMOTL1Q8IY63 956 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 CCDC144CPQ8IYA2 1237 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 FANCBQ8NB91 859 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 PHKBQ93100 1093 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 PDLIM2Q96JY6 352 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 SLC26A6Q9BXS9 759 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 DACT1Q9NYF0 836 aa19.64■□□□□ 0.73
PTPRC-206ENST00000413409 A0A1W2PQ27 194 aa19.63■□□□□ 0.73
PTPRC-206ENST00000413409 A0A1W2PQ64 194 aa19.63■□□□□ 0.73
PTPRC-206ENST00000413409 A0A1W2PQD8 194 aa19.63■□□□□ 0.73
PTPRC-206ENST00000413409 USP17L10C9JJH3 530 aa19.63■□□□□ 0.73
PTPRC-206ENST00000413409 DEXIO95424 95 aa19.63■□□□□ 0.73
PTPRC-206ENST00000413409 IFIT1BQ5T764 474 aaKnown RBP19.63■□□□□ 0.73
PTPRC-206ENST00000413409 C12orf60Q5U649 245 aa19.63■□□□□ 0.73
PTPRC-206ENST00000413409 CATIPQ7Z7H3 387 aa19.63■□□□□ 0.73
PTPRC-206ENST00000413409 TIFAQ96CG3 184 aa19.63■□□□□ 0.73
PTPRC-206ENST00000413409 RNF26Q9BY78 433 aaPredicted RBP19.63■□□□□ 0.73
PTPRC-206ENST00000413409 CHD7Q9P2D1 2997 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 KIF28PB7ZC32 967 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 KBTBD13C9JR72 458 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 CCDC192P0DO97 292 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 U2AF2P26368 475 aaKnown RBP eCLIP19.62■□□□□ 0.73
PTPRC-206ENST00000413409 USP5P45974 858 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 ADGRE1Q14246 886 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 CCDC178Q5BJE1 867 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 C1orf53Q5VUE5 145 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 CRACR2BQ8N4Y2 399 aaPredicted RBP19.62■□□□□ 0.73
PTPRC-206ENST00000413409 LINC00301Q8NCQ3 95 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 SH3RF3Q8TEJ3 882 aaPredicted RBP19.62■□□□□ 0.73
PTPRC-206ENST00000413409 GTF3C2Q8WUA4 911 aaPredicted RBP19.62■□□□□ 0.73
PTPRC-206ENST00000413409 PRDM12Q9H4Q4 367 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 DNAJC18Q9H819 358 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 MCM9Q9NXL9 1143 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 HERC5Q9UII4 1024 aaKnown RBP19.62■□□□□ 0.73
PTPRC-206ENST00000413409 RABGAP1Q9Y3P9 1069 aa19.62■□□□□ 0.73
PTPRC-206ENST00000413409 SMIM22K7EJ46 135 aa19.61■□□□□ 0.73
PTPRC-206ENST00000413409 MYCNP04198 464 aaPredicted RBP19.61■□□□□ 0.73
PTPRC-206ENST00000413409 ASNSP08243 561 aa19.61■□□□□ 0.73
PTPRC-206ENST00000413409 GRB14Q14449 540 aa19.61■□□□□ 0.73
PTPRC-206ENST00000413409 CCDC85BQ15834 202 aaPredicted RBP19.61■□□□□ 0.73
PTPRC-206ENST00000413409 WDR78Q5VTH9 848 aa19.61■□□□□ 0.73
PTPRC-206ENST00000413409 CCDC73Q6ZRK6 1079 aa19.61■□□□□ 0.73
PTPRC-206ENST00000413409 STK11IPQ8N1F8 1099 aa19.61■□□□□ 0.73
PTPRC-206ENST00000413409 AIFM3Q96NN9 605 aa19.61■□□□□ 0.73
PTPRC-206ENST00000413409 FTOQ9C0B1 505 aaKnown RBP eCLIP19.61■□□□□ 0.73
PTPRC-206ENST00000413409 TNMDQ9H2S6 317 aa19.61■□□□□ 0.73
PTPRC-206ENST00000413409 SIPA1L1O43166 1804 aa19.61■□□□□ 0.73
PTPRC-206ENST00000413409 MYH6P13533 1939 aa19.6■□□□□ 0.73
PTPRC-206ENST00000413409 CTAGE5O15320 804 aa19.6■□□□□ 0.73
PTPRC-206ENST00000413409 CYP2D6P10635 497 aa19.6■□□□□ 0.73
PTPRC-206ENST00000413409 PBX2P40425 430 aa19.6■□□□□ 0.73
PTPRC-206ENST00000413409 STK38Q15208 465 aa19.6■□□□□ 0.73
PTPRC-206ENST00000413409 LRRC41Q15345 812 aa19.6■□□□□ 0.73
PTPRC-206ENST00000413409 GAS2L1Q99501 681 aaPredicted RBP19.6■□□□□ 0.73
PTPRC-206ENST00000413409 C1QTNF1Q9BXJ1 281 aa19.6■□□□□ 0.73
PTPRC-206ENST00000413409 ARIH1Q9Y4X5 557 aaPredicted RBP19.6■□□□□ 0.73
PTPRC-206ENST00000413409 GRXCR1A8MXD5 290 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 KIAA0355O15063 1070 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 NR1I2O75469 434 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 PRDM1O75626 825 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 GDF11O95390 407 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 ME1P48163 572 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 CEBPZQ03701 1054 aaKnown RBP19.59■□□□□ 0.73
PTPRC-206ENST00000413409 FAM160A1Q05DH4 1040 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 TROAPQ12815 778 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 SAFBQ15424 915 aaKnown RBP eCLIP19.59■□□□□ 0.73
PTPRC-206ENST00000413409 ADALQ6DHV7 355 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 NUP133Q8WUM0 1156 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 MRPS27Q92552 414 aaKnown RBP19.59■□□□□ 0.73
PTPRC-206ENST00000413409 ANKS1AQ92625 1134 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 BTBD7Q9P203 1132 aa19.59■□□□□ 0.73
PTPRC-206ENST00000413409 TCF20Q9UGU0 1960 aaKnown RBP19.59■□□□□ 0.73
PTPRC-206ENST00000413409 SPTLC2O15270 562 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 MMP1P03956 469 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 CLTBP09497 229 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 CCNA1P78396 465 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 FPGSQ05932 587 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 FUT2Q10981 343 aa19.58■□□□□ 0.73
PTPRC-206ENST00000413409 TPRNQ4KMQ1 711 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms