RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GPKOWQ92917 476 aaPredicted RBP eCLIP19.61■□□□□ 0.731e-6■□□□□ 11.3
SDCBP-202ENST00000413219 NSUN4Q96CB9 384 aaKnown RBP19.61■□□□□ 0.73
SDCBP-202ENST00000413219 OSBPL9Q96SU4 736 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 LRRC1Q9BTT6 524 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 TCP11L1Q9NUJ3 509 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 CCDC87Q9NVE4 849 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 PLCG1P19174 1290 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 SKOR1P84550 965 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 AMPD3Q01432 767 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 GRM4Q14833 912 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 GLE1Q53GS7 698 aaKnown RBP19.61■□□□□ 0.73
SDCBP-202ENST00000413219 INTS5Q6P9B9 1019 aaKnown RBP19.61■□□□□ 0.73
SDCBP-202ENST00000413219 LRRC15Q8TF66 581 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 DMGDHQ9UI17 866 aaKnown RBP19.61■□□□□ 0.73
SDCBP-202ENST00000413219 CAPN6Q9Y6Q1 641 aa19.61■□□□□ 0.73
SDCBP-202ENST00000413219 SHTN1A0MZ66 631 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 PJA2O43164 708 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 ADAMTS2O95450 1211 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 CCDC178Q5BJE1 867 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 CNNM4Q6P4Q7 775 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 SUGP1Q8IWZ8 645 aaKnown RBP19.6■□□□□ 0.73
SDCBP-202ENST00000413219 STIM2Q9P246 746 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 ARHGAP20Q9P2F6 1191 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 SIK3Q9Y2K2 1263 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 EXOC5O00471 708 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 KIF11P52732 1056 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 STK4Q13043 487 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 INF2Q27J81 1249 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 ANKRD18AQ8IVF6 992 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 FAM84BQ96KN1 310 aaPredicted RBP19.6■□□□□ 0.73
SDCBP-202ENST00000413219 YY1AP1Q9H869 796 aa19.6■□□□□ 0.73
SDCBP-202ENST00000413219 GRIN2DO15399 1336 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 KIAA1551Q9HCM1 1747 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 HOXA7P31268 230 aaPredicted RBP19.59■□□□□ 0.73
SDCBP-202ENST00000413219 CCT5P48643 541 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 ASIC1P78348 528 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 EZH2Q15910 746 aaKnown RBP19.59■□□□□ 0.73
SDCBP-202ENST00000413219 VWA3BQ502W6 1294 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 CENPPQ6IPU0 288 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 TYW1BQ6NUM6 668 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 KRT26Q7Z3Y9 468 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 CCDC84Q86UT8 332 aaPredicted RBP19.59■□□□□ 0.73
SDCBP-202ENST00000413219 HDAC7Q8WUI4 952 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 PLIN2Q99541 437 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 BSDC1Q9NW68 430 aaPredicted RBP19.59■□□□□ 0.73
SDCBP-202ENST00000413219 BARHL2Q9NY43 387 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 RNF14Q9UBS8 474 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 TSKSQ9UJT2 592 aa19.59■□□□□ 0.73
SDCBP-202ENST00000413219 NIP7Q9Y221 180 aaKnown RBP eCLIP19.59■□□□□ 0.73
SDCBP-202ENST00000413219 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.73
SDCBP-202ENST00000413219 PAFAH1B1P43034 410 aa19.58■□□□□ 0.73
SDCBP-202ENST00000413219 GTF2A1P52655 376 aaPredicted RBP19.58■□□□□ 0.73
SDCBP-202ENST00000413219 MECOMQ03112 1051 aa19.58■□□□□ 0.73
SDCBP-202ENST00000413219 EVX2Q03828 476 aa19.58■□□□□ 0.73
SDCBP-202ENST00000413219 CCDC181Q5TID7 509 aa19.58■□□□□ 0.73
SDCBP-202ENST00000413219 HAUS3Q68CZ6 603 aa19.58■□□□□ 0.73
SDCBP-202ENST00000413219 ARHGAP27Q6ZUM4 889 aa19.58■□□□□ 0.73
SDCBP-202ENST00000413219 FBXO33Q7Z6M2 555 aa19.58■□□□□ 0.73
SDCBP-202ENST00000413219 PNMA1Q8ND90 353 aa19.58■□□□□ 0.73
SDCBP-202ENST00000413219 EDEM3Q9BZQ6 932 aa19.58■□□□□ 0.73
SDCBP-202ENST00000413219 MLXIPQ9HAP2 919 aa19.58■□□□□ 0.73
SDCBP-202ENST00000413219 ATXN2Q99700 1313 aaKnown RBP19.58■□□□□ 0.72
SDCBP-202ENST00000413219 ANKRD65E5RJM6 399 aa19.58■□□□□ 0.72
SDCBP-202ENST00000413219 STXBP3O00186 592 aa19.58■□□□□ 0.72
SDCBP-202ENST00000413219 HSF2BPO75031 334 aa19.58■□□□□ 0.72
SDCBP-202ENST00000413219 MOCS3O95396 460 aa19.58■□□□□ 0.72
SDCBP-202ENST00000413219 FGFR1OPO95684 399 aaKnown RBP19.58■□□□□ 0.72
SDCBP-202ENST00000413219 OR52Z1P0C646 297 aa19.58■□□□□ 0.72
SDCBP-202ENST00000413219 EIF4A3P38919 411 aaKnown RBP19.58■□□□□ 0.72
SDCBP-202ENST00000413219 APBA1Q02410 837 aa19.58■□□□□ 0.72
SDCBP-202ENST00000413219 C2CD5Q86YS7 1000 aa19.58■□□□□ 0.72
SDCBP-202ENST00000413219 SMCR8Q8TEV9 937 aaPredicted RBP19.58■□□□□ 0.72
SDCBP-202ENST00000413219 RRP36Q96EU6 259 aaKnown RBP19.58■□□□□ 0.72
SDCBP-202ENST00000413219 RUFY1Q96T51 708 aa19.58■□□□□ 0.72
SDCBP-202ENST00000413219 FAM169AQ9Y6X4 670 aa19.58■□□□□ 0.72
SDCBP-202ENST00000413219 CASZ1Q86V15 1759 aa19.57■□□□□ 0.72
SDCBP-202ENST00000413219 XIRP1Q702N8 1843 aaKnown RBP19.57■□□□□ 0.72
SDCBP-202ENST00000413219 PLEKP08567 350 aaPredicted RBP19.57■□□□□ 0.72
SDCBP-202ENST00000413219 GNGT1P63211 74 aa19.57■□□□□ 0.72
SDCBP-202ENST00000413219 MAN2A1Q16706 1144 aa19.57■□□□□ 0.72
SDCBP-202ENST00000413219 MMS22LQ6ZRQ5 1243 aa19.57■□□□□ 0.72
SDCBP-202ENST00000413219 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.57■□□□□ 0.72
SDCBP-202ENST00000413219 BCAS4Q8TDM0 211 aa19.57■□□□□ 0.72
SDCBP-202ENST00000413219 NDST4Q9H3R1 872 aa19.57■□□□□ 0.72
SDCBP-202ENST00000413219 DEF6Q9H4E7 631 aa19.57■□□□□ 0.72
SDCBP-202ENST00000413219 MAD2L2Q9UI95 211 aa19.57■□□□□ 0.72
SDCBP-202ENST00000413219 COL4A1P02462 1669 aa19.57■□□□□ 0.72
SDCBP-202ENST00000413219 CYP2D6P10635 497 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 GUCY2CP25092 1073 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 ORC2Q13416 577 aaPredicted RBP19.56■□□□□ 0.72
SDCBP-202ENST00000413219 TXNRD1Q16881 649 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 KRT25Q7Z3Z0 450 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 STAG2Q8N3U4 1231 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 RNF10Q8N5U6 811 aaKnown RBP19.56■□□□□ 0.72
SDCBP-202ENST00000413219 LZTS2Q9BRK4 669 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 SEMA6BQ9H3T3 888 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 BAZ2BQ9UIF8 2168 aaKnown RBP19.56■□□□□ 0.72
SDCBP-202ENST00000413219 AKR1B10O60218 316 aa19.56■□□□□ 0.72
SDCBP-202ENST00000413219 FCER1AP12319 257 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms