RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 COL24A1Q17RW2 1714 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 RASSF10A6NK89 507 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 TNNT3P45378 269 aaPredicted RBP21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 CNNM4Q6P4Q7 775 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 SPZ1Q9BXG8 430 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 C6orf50Q9HD87 102 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 CNTNAP4Q9C0A0 1308 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 A0A1W2PQJ5 194 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 TARSL2A2RTX5 802 aaKnown RBP21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 RCCD1A6NED2 376 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 ZBTB22O15209 634 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 SMIM5Q71RC9 77 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 NEK8Q86SG6 692 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 CCDC24Q8N4L8 307 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 TGFBRAP1Q8WUH2 860 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 ERGIC2Q96RQ1 377 aa21.21■□□□□ 0.99
TNFRSF8-202ENST00000413146 NUTM2BA6NNL0 878 aaPredicted RBP21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 NUTM2EB1AL46 878 aaPredicted RBP21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 PHACTR2O75167 634 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 FCER1AP12319 257 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 IDEP14735 1019 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 GNA11P29992 359 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 KIF5AQ12840 1032 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 FIGNQ5HY92 759 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 MIIPQ5JXC2 388 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 TSGA10Q9BZW7 698 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 ZNF287Q9HBT7 754 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 SBF2Q86WG5 1849 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 IRS2Q9Y4H2 1338 aa21.2■□□□□ 0.98
TNFRSF8-202ENST00000413146 SMCO2A6NFE2 343 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 RASA1P20936 1047 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 TECP42680 631 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 CDK17Q00537 523 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 SPA17Q15506 151 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 DIXDC1Q155Q3 683 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 ZSCAN29Q8IWY8 852 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 IQCDQ96DY2 449 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 CALML4Q96GE6 196 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 NARFQ9UHQ1 456 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 SPATA31A5Q5VU36 1347 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 SPATA31A7Q8IWB4 1347 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 MACROD2A1Z1Q3 448 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 VAV2P52735 878 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 SOGA3Q5TF21 947 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 IQCEQ6IPM2 695 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 TPTE2Q6XPS3 522 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 SECISBP2LQ93073 1101 aaKnown RBP21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 CCDC42Q96M95 316 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 TSPYL1Q9H0U9 437 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 CPVLQ9H3G5 476 aa21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 SRP68Q9UHB9 627 aaKnown RBP21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 SAP30BPQ9UHR5 308 aaKnown RBP21.19■□□□□ 0.98
TNFRSF8-202ENST00000413146 CYP27A1Q02318 531 aa21.18■□□□□ 0.98
TNFRSF8-202ENST00000413146 RRP36Q96EU6 259 aaKnown RBP21.18■□□□□ 0.98
TNFRSF8-202ENST00000413146 PURBQ96QR8 312 aaKnown RBP21.18■□□□□ 0.98
TNFRSF8-202ENST00000413146 JADE2Q9NQC1 790 aa21.18■□□□□ 0.98
TNFRSF8-202ENST00000413146 ANKIB1Q9P2G1 1089 aa21.18■□□□□ 0.98
TNFRSF8-202ENST00000413146 SEC63Q9UGP8 760 aaKnown RBP21.18■□□□□ 0.98
TNFRSF8-202ENST00000413146 COBLL1Q53SF7 1204 aa21.18■□□□□ 0.98
TNFRSF8-202ENST00000413146 MAPKAPK5Q8IW41 473 aa21.18■□□□□ 0.98
TNFRSF8-202ENST00000413146 IVLP07476 585 aa21.17■□□□□ 0.98
TNFRSF8-202ENST00000413146 GOLGA6L1Q8N7Z2 621 aa21.17■□□□□ 0.98
TNFRSF8-202ENST00000413146 DUSP10Q9Y6W6 482 aa21.17■□□□□ 0.98
TNFRSF8-202ENST00000413146 ZPR1O75312 459 aa21.17■□□□□ 0.98
TNFRSF8-202ENST00000413146 LDHCP07864 332 aa21.17■□□□□ 0.98
TNFRSF8-202ENST00000413146 AARSP49588 968 aaKnown RBP eCLIP21.17■□□□□ 0.98
TNFRSF8-202ENST00000413146 PPP4CP60510 307 aa21.17■□□□□ 0.98
TNFRSF8-202ENST00000413146 CCDC96Q2M329 555 aa21.17■□□□□ 0.98
TNFRSF8-202ENST00000413146 KIAA0895Q8NCT3 520 aa21.17■□□□□ 0.98
TNFRSF8-202ENST00000413146 USO1O60763 962 aaKnown RBP21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 FNBP4Q8N3X1 1017 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 TBCKQ8TEA7 893 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 EYA3Q99504 573 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 FAM204AQ9H8W3 233 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 SLC39A2Q9NP94 309 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 LRWD1Q9UFC0 647 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 HPCAL4Q9UM19 191 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 ZNF185O15231 689 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 RNF40O75150 1001 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 ORC2Q13416 577 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 CCDC70Q6NSX1 233 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 BARGINQ6ZT62 677 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 SV2BQ7L1I2 683 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 TRIM58Q8NG06 486 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 HPS3Q969F9 1004 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 MMTAG2Q9BU76 263 aaKnown RBP21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 SEMA6BQ9H3T3 888 aa21.16■□□□□ 0.98
TNFRSF8-202ENST00000413146 SNED1Q8TER0 1413 aa21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 TM4SF1P30408 202 aa21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 POTEDQ86YR6 584 aa21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 REXO1Q8N1G1 1221 aaKnown RBP21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 COG1Q8WTW3 980 aa21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 CDK5RAP2Q96SN8 1893 aa21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 TACC1O75410 805 aa21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 GRIK5Q16478 980 aa21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 VWA3BQ502W6 1294 aa21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 CENPPQ6IPU0 288 aa21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 USP17L2Q6R6M4 530 aa21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 IFIH1Q9BYX4 1025 aaKnown RBP21.15■□□□□ 0.98
TNFRSF8-202ENST00000413146 PLAGL2Q9UPG8 496 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms