RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 WASH4PA8MWX3 477 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 EFCAB14O75071 495 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 GSTM1P09488 218 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 C6orf222P0C671 652 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-204ENST00000412061 IFNGR1P15260 489 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 SEPHS1P49903 392 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 CYP4F3Q08477 520 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 PRSS53Q2L4Q9 553 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 MAP9Q49MG5 647 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 TM4SF20Q53R12 229 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 RCSD1Q6JBY9 416 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 USP53Q70EK8 1073 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 MAMDC2Q7Z304 686 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-204ENST00000412061 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 KSR1Q8IVT5 923 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 PTPRN2Q92932 1015 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 HRASLS5Q96KN8 279 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 CLUHP3Q96NS8 147 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 FOXP3Q9BZS1 431 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 NDOR1Q9UHB4 597 aa5.94□□□□□ -1.46
BRCA1-204ENST00000412061 BLACEA4D250 179 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 IRS4O14654 1257 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-204ENST00000412061 MEFVO15553 781 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-204ENST00000412061 KCNQ2O43526 872 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 THBDP07204 575 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 FAM50AQ14320 339 aaKnown RBP5.93□□□□□ -1.46
BRCA1-204ENST00000412061 NTRK3Q16288 839 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 RTP2Q5QGT7 225 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 ACBD5Q5T8D3 534 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-204ENST00000412061 EEF1DP3Q658K8 133 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 TSHZ1Q6ZSZ6 1077 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 NBPF11Q86T75 865 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 CREG2Q8IUH2 290 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 PPIL6Q8IXY8 311 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 KREMEN2Q8NCW0 462 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 NPLOC4Q8TAT6 608 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 FRS2Q8WU20 508 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 DCAF4Q8WV16 495 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 ASB11Q8WXH4 323 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 EVI5LQ96CN4 794 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 SLC52A2Q9HAB3 445 aa5.93□□□□□ -1.46
BRCA1-204ENST00000412061 INTS7Q9NVH2 962 aaKnown RBP5.93□□□□□ -1.46
BRCA1-204ENST00000412061 BCCIPQ9P287 314 aaKnown RBP eCLIP5.93□□□□□ -1.46
BRCA1-204ENST00000412061 KIF3BO15066 747 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 APPP05067 770 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 IRX6P78412 446 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-204ENST00000412061 EGR3Q06889 387 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 UBE4AQ14139 1066 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 RALBP1Q15311 655 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 E4F1Q66K89 784 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-204ENST00000412061 DDX42Q86XP3 938 aaKnown RBP eCLIP5.92□□□□□ -1.46
BRCA1-204ENST00000412061 GSTCDQ8NEC7 633 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 SLC7A14Q8TBB6 771 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 CHAC2Q8WUX2 184 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 MISP3Q96FF7 219 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 CDADC1Q9BWV3 514 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 ATP13A1Q9HD20 1204 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 GPRC5CQ9NQ84 441 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 AP5S1Q9NUS5 200 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 VAV3Q9UKW4 847 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 PCDHA11Q9Y5I1 949 aa5.92□□□□□ -1.46
BRCA1-204ENST00000412061 TRBV23OR9-2A0A075B6M9 112 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 AQP7O14520 342 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 HYAL3O43820 417 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-204ENST00000412061 FKTNO75072 461 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 ALDH1L1O75891 902 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 TGFB1P01137 390 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 ESR1P03372 595 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 MYCLP1P12525 358 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-204ENST00000412061 PAMP19021 973 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 POU3F3P20264 500 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-204ENST00000412061 GRIK1P39086 918 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 PRKCQQ04759 706 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 KCNAB2Q13303 367 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 LRP8Q14114 963 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 TESK1Q15569 626 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 AOC3Q16853 763 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 DENND5AQ6IQ26 1287 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 STYK1Q6J9G0 422 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 RSPO2Q6UXX9 243 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-204ENST00000412061 BRAPQ7Z569 592 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 ZFYVE21Q9BQ24 234 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 UBA5Q9GZZ9 404 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 TRIM39Q9HCM9 518 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 CLEC1BQ9P126 229 aa5.91□□□□□ -1.46
BRCA1-204ENST00000412061 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-204ENST00000412061 FGF10O15520 208 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-204ENST00000412061 PLS3P13797 630 aa5.9□□□□□ -1.47
BRCA1-204ENST00000412061 NAT1P18440 290 aa5.9□□□□□ -1.47
BRCA1-204ENST00000412061 HOXA10P31260 410 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-204ENST00000412061 LTBRP36941 435 aa5.9□□□□□ -1.47
BRCA1-204ENST00000412061 GNALP38405 381 aa5.9□□□□□ -1.47
BRCA1-204ENST00000412061 NFKB2Q00653 900 aa5.9□□□□□ -1.47
BRCA1-204ENST00000412061 TEKQ02763 1124 aa5.9□□□□□ -1.47
BRCA1-204ENST00000412061 NFE2Q16621 373 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-204ENST00000412061 CT47A1Q5JQC4 288 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-204ENST00000412061 IQCEQ6IPM2 695 aa5.9□□□□□ -1.47
BRCA1-204ENST00000412061 CCSAPQ6IQ19 270 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-204ENST00000412061 CYP2R1Q6VVX0 501 aa5.9□□□□□ -1.47
BRCA1-204ENST00000412061 THNSL2Q86YJ6 484 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms