RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 CYP19A1P11511 503 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 POLR2EP19388 210 aaKnown RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 KRT20P35900 424 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 RGS7P49802 495 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 RIPK4P57078 832 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 RCN1Q15293 331 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 CCDC142Q17RM4 750 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 DSTYKQ6XUX3 929 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 DYMQ7RTS9 669 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 FAM200AQ8TCP9 573 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 TBC1D23Q9NUY8 699 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 GGA2Q9UJY4 613 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 A0A1B0GVL5 298 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 SUPT3HB4E1H0 165 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 GNB5O14775 395 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 FKBP9O95302 570 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 PLS3P13797 630 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 STXBP2Q15833 593 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 FKBP9P1Q75LS8 142 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 POLNQ7Z5Q5 900 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 BBS5Q8N3I7 341 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 CCDC51Q96ER9 411 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 NSMCE4AQ9NXX6 385 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 UVRAGQ9P2Y5 699 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 WARS2Q9UGM6 360 aaKnown RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 MID2Q9UJV3 735 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 SNX2O60749 519 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 KRT14P02533 472 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 PRPSAP1Q14558 356 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 WTAPQ15007 396 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 C4orf46Q504U0 113 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 BLOC1S2Q6QNY1 142 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 PEG10Q86TG7 708 aaKnown RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 XXYLT1Q8NBI6 393 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SNX19Q92543 992 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 MTERF3Q96E29 417 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 LRRC40Q9H9A6 602 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 PARP3Q9Y6F1 533 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 A8MXQ7 604 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 H7C1W4 665 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 PPP2R5EQ16537 467 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 ANKS3Q6ZW76 656 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 TMTC3Q6ZXV5 915 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 HACE1Q8IYU2 909 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CENPSQ8N2Z9 138 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 TMIEQ8NEW7 156 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SPATA18Q8TC71 538 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 FAM45AQ8TCE6 357 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 ABI2Q9NYB9 513 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 LMCD1Q9NZU5 365 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 ASAP1Q9ULH1 1129 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CCT8L1PA6NM43 557 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 TEX46H3BTG2 121 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 VWA5AO00534 786 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 ATP9AO75110 1047 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 GLRX3O76003 335 aaKnown RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 APOC1P02654 83 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 RPN1P04843 607 aaKnown RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 GJC1P36383 396 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SF3B3Q15393 1217 aaKnown RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 WDR44Q5JSH3 913 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CAPN12Q6ZSI9 719 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SCAIQ8N9R8 606 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 ANKRD49Q8WVL7 239 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 VPS39Q96JC1 886 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 PHB2Q99623 299 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CNNM1Q9NRU3 951 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 TMCC3Q9ULS5 477 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 PRR23AA6NEV1 266 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 MAP4P27816 1152 aaKnown RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 PURAQ00577 322 aaKnown RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 UBXN1Q04323 297 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 TYRO3Q06418 890 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 AKNAD1Q5T1N1 836 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 KRT27Q7Z3Y8 459 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CDAN1Q8IWY9 1227 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 C19orf18Q8NEA5 215 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 ATP6V1C2Q8NEY4 427 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CDKL2Q92772 493 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 RMDN1Q96DB5 314 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SCYL1Q96KG9 808 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CARD6Q9BX69 1037 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 OGFRQ9NZT2 677 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 AP3B1O00203 1094 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 FYNP06241 537 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 TGFBR2P37173 567 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 IDI1Q13907 227 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 LVRNQ6Q4G3 990 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SND1Q7KZF4 910 aaKnown RBP eCLIP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 BRAPQ7Z569 592 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CNNM3Q8NE01 707 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CLHC1Q8NHS4 586 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 GANCQ8TET4 914 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 S100PBPQ96BU1 408 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 HAVCR1Q96D42 359 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 TRIM36Q9NQ86 728 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CTNNAL1Q9UBT7 734 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SAMM50Q9Y512 469 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SRGAP3O43295 1099 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms