RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 PAWRQ96IZ0 340 aaKnown RBP18.93■□□□□ 0.62
NOD1-202ENST00000411552 KATNBL1Q9H079 304 aa18.93■□□□□ 0.62
NOD1-202ENST00000411552 ZSWIM6Q9HCJ5 1215 aa18.93■□□□□ 0.62
NOD1-202ENST00000411552 ZHX1Q9UKY1 873 aaPredicted RBP18.93■□□□□ 0.62
NOD1-202ENST00000411552 LRRC37A2A6NM11 1700 aa18.93■□□□□ 0.62
NOD1-202ENST00000411552 OPLAHO14841 1288 aa18.92■□□□□ 0.62
NOD1-202ENST00000411552 ALDH5A1P51649 535 aaPredicted RBP18.92■□□□□ 0.62
NOD1-202ENST00000411552 APOBRQ0VD83 1088 aa18.92■□□□□ 0.62
NOD1-202ENST00000411552 ACVR2BQ13705 512 aa18.92■□□□□ 0.62
NOD1-202ENST00000411552 RUFY3Q7L099 469 aa18.92■□□□□ 0.62
NOD1-202ENST00000411552 MCF2L2Q86YR7 1114 aa18.92■□□□□ 0.62
NOD1-202ENST00000411552 FBXL16Q8N461 479 aa18.92■□□□□ 0.62
NOD1-202ENST00000411552 BRF1Q92994 677 aa18.92■□□□□ 0.62
NOD1-202ENST00000411552 RRP36Q96EU6 259 aaKnown RBP18.92■□□□□ 0.62
NOD1-202ENST00000411552 MAF1Q9H063 256 aa18.92■□□□□ 0.62
NOD1-202ENST00000411552 ABHD16BQ9H3Z7 469 aa18.92■□□□□ 0.62
NOD1-202ENST00000411552 ADD3Q9UEY8 706 aaKnown RBP18.92■□□□□ 0.62
NOD1-202ENST00000411552 AKR1A1P14550 325 aa18.91■□□□□ 0.62
NOD1-202ENST00000411552 TRAF1Q13077 416 aa18.91■□□□□ 0.62
NOD1-202ENST00000411552 RTN1Q16799 776 aa18.91■□□□□ 0.62
NOD1-202ENST00000411552 CCDC82Q8N4S0 544 aa18.91■□□□□ 0.62
NOD1-202ENST00000411552 MORC4Q8TE76 937 aa18.91■□□□□ 0.62
NOD1-202ENST00000411552 LENG1Q96BZ8 264 aaPredicted RBP18.91■□□□□ 0.62
NOD1-202ENST00000411552 AGXT2Q9BYV1 514 aa18.91■□□□□ 0.62
NOD1-202ENST00000411552 TM6SF1Q9BZW5 370 aa18.91■□□□□ 0.62
NOD1-202ENST00000411552 COL20A1Q9P218 1284 aa18.91■□□□□ 0.62
NOD1-202ENST00000411552 NAP1L2Q9ULW6 460 aaPredicted RBP18.91■□□□□ 0.62
NOD1-202ENST00000411552 CYP46A1Q9Y6A2 500 aa18.91■□□□□ 0.62
NOD1-202ENST00000411552 GOLGA8AA7E2F4 631 aa18.9■□□□□ 0.62
NOD1-202ENST00000411552 GOLGA8BA8MQT2 603 aa18.9■□□□□ 0.62
NOD1-202ENST00000411552 SEC24BO95487 1268 aa18.9■□□□□ 0.62
NOD1-202ENST00000411552 RARBP10826 455 aa18.9■□□□□ 0.62
NOD1-202ENST00000411552 RCAN1P53805 252 aa18.9■□□□□ 0.62
NOD1-202ENST00000411552 CCDC144BQ3MJ40 725 aa18.9■□□□□ 0.62
NOD1-202ENST00000411552 NECAB2Q7Z6G3 386 aa18.9■□□□□ 0.62
NOD1-202ENST00000411552 DNERQ8NFT8 737 aa18.9■□□□□ 0.62
NOD1-202ENST00000411552 SYTL5Q8TDW5 730 aaPredicted RBP18.9■□□□□ 0.62
NOD1-202ENST00000411552 UPF3BQ9BZI7 483 aaKnown RBP18.9■□□□□ 0.62
NOD1-202ENST00000411552 RBM28Q9NW13 759 aaKnown RBP18.9■□□□□ 0.62
NOD1-202ENST00000411552 SEC63Q9UGP8 760 aaKnown RBP18.9■□□□□ 0.62
NOD1-202ENST00000411552 FAM184BQ9ULE4 1060 aa18.9■□□□□ 0.62
NOD1-202ENST00000411552 LOC102724159A0A0B4J2E5 919 aa18.89■□□□□ 0.61
NOD1-202ENST00000411552 ADCY6O43306 1168 aa18.89■□□□□ 0.61
NOD1-202ENST00000411552 EIF5BO60841 1220 aaKnown RBP18.89■□□□□ 0.61
NOD1-202ENST00000411552 CFBP00751 764 aa18.89■□□□□ 0.61
NOD1-202ENST00000411552 HSD17B4P51659 736 aa18.89■□□□□ 0.61
NOD1-202ENST00000411552 GHRHRQ02643 423 aa18.89■□□□□ 0.61
NOD1-202ENST00000411552 PWP2Q15269 919 aaKnown RBP18.89■□□□□ 0.61
NOD1-202ENST00000411552 EEPD1Q7L9B9 569 aa18.89■□□□□ 0.61
NOD1-202ENST00000411552 FBXO16Q8IX29 292 aaPredicted RBP18.89■□□□□ 0.61
NOD1-202ENST00000411552 FAM217BQ9NTX9 383 aaPredicted RBP18.89■□□□□ 0.61
NOD1-202ENST00000411552 hCG_1642624A0A1W2PR95 340 aa18.88■□□□□ 0.61
NOD1-202ENST00000411552 DNM1LO00429 736 aa18.88■□□□□ 0.61
NOD1-202ENST00000411552 CDC27P30260 824 aa18.88■□□□□ 0.61
NOD1-202ENST00000411552 FUT2Q10981 343 aa18.88■□□□□ 0.61
NOD1-202ENST00000411552 TOB2Q14106 344 aaPredicted RBP18.88■□□□□ 0.61
NOD1-202ENST00000411552 C8orf34Q49A92 452 aa18.88■□□□□ 0.61
NOD1-202ENST00000411552 GJC2Q5T442 439 aaPredicted RBP18.88■□□□□ 0.61
NOD1-202ENST00000411552 ARRDC4Q8NCT1 418 aa18.88■□□□□ 0.61
NOD1-202ENST00000411552 TAAR1Q96RJ0 339 aa18.88■□□□□ 0.61
NOD1-202ENST00000411552 C11orf49Q9H6J7 331 aa18.88■□□□□ 0.61
NOD1-202ENST00000411552 XPNPEP3Q9NQH7 507 aa18.88■□□□□ 0.61
NOD1-202ENST00000411552 CNTNAP5Q8WYK1 1306 aa18.88■□□□□ 0.61
NOD1-202ENST00000411552 PGK1P00558 417 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 COL6A1P12109 1028 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 EDNRBP24530 442 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 HOXA13P31271 388 aaPredicted RBP18.87■□□□□ 0.61
NOD1-202ENST00000411552 METAP2P50579 478 aaKnown RBP eCLIP18.87■□□□□ 0.61
NOD1-202ENST00000411552 ANAPC15P60006 121 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 PDE4DQ08499 809 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 LRRC41Q15345 812 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 ALPK3Q96L96 1907 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 HTATIP2Q9BUP3 242 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 VTA1Q9NP79 307 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 PDGFCQ9NRA1 345 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 PCDH10Q9P2E7 1040 aa18.87■□□□□ 0.61
NOD1-202ENST00000411552 NID2Q14112 1375 aa18.86■□□□□ 0.61
NOD1-202ENST00000411552 SYNRGQ9UMZ2 1314 aa18.86■□□□□ 0.61
NOD1-202ENST00000411552 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.86■□□□□ 0.61
NOD1-202ENST00000411552 DUSP11O75319 330 aaKnown RBP18.86■□□□□ 0.61
NOD1-202ENST00000411552 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
NOD1-202ENST00000411552 ADCYAP1R1P41586 468 aa18.86■□□□□ 0.61
NOD1-202ENST00000411552 EVCP57679 992 aa18.86■□□□□ 0.61
NOD1-202ENST00000411552 TAPT1Q6NXT6 567 aa18.86■□□□□ 0.61
NOD1-202ENST00000411552 SAMD3Q8N6K7 520 aa18.86■□□□□ 0.61
NOD1-202ENST00000411552 NSUN6Q8TEA1 469 aaKnown RBP18.86■□□□□ 0.61
NOD1-202ENST00000411552 RMDN3Q96TC7 470 aa18.86■□□□□ 0.61
NOD1-202ENST00000411552 MPHOSPH6Q99547 160 aaKnown RBP18.86■□□□□ 0.61
NOD1-202ENST00000411552 MAP3K20Q9NYL2 800 aaKnown RBP18.86■□□□□ 0.61
NOD1-202ENST00000411552 CEP290O15078 2479 aa18.85■□□□□ 0.61
NOD1-202ENST00000411552 B4DLN1 442 aa18.85■□□□□ 0.61
NOD1-202ENST00000411552 KBTBD13C9JR72 458 aa18.85■□□□□ 0.61
NOD1-202ENST00000411552 GCOM1H8Y6P7 765 aaPredicted RBP18.85■□□□□ 0.61
NOD1-202ENST00000411552 ADAMTS4O75173 837 aa18.85■□□□□ 0.61
NOD1-202ENST00000411552 POLR2MP0CAP2 368 aa18.85■□□□□ 0.61
NOD1-202ENST00000411552 ADD1P35611 737 aaKnown RBP18.85■□□□□ 0.61
NOD1-202ENST00000411552 MRPL12P52815 198 aaKnown RBP18.85■□□□□ 0.61
NOD1-202ENST00000411552 TNFAIP2Q03169 654 aa18.85■□□□□ 0.61
NOD1-202ENST00000411552 PPP2R5BQ15173 497 aa18.85■□□□□ 0.61
NOD1-202ENST00000411552 IL17RAQ96F46 866 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms