RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 HLA-DQA1Q5Y7H0 255 aa3.93□□□□□ -1.78
RNU4-61P-201ENST00000411243 Q6ZPA2 131 aa3.93□□□□□ -1.78
RNU4-61P-201ENST00000411243 PRIMA1Q86XR5 153 aa3.93□□□□□ -1.78
RNU4-61P-201ENST00000411243 KBTBD2Q8IY47 623 aa3.93□□□□□ -1.78
RNU4-61P-201ENST00000411243 ZNF483Q8TF39 744 aaPredicted RBP3.93□□□□□ -1.78
RNU4-61P-201ENST00000411243 SYT3Q9BQG1 590 aa3.93□□□□□ -1.78
RNU4-61P-201ENST00000411243 PTGFRNQ9P2B2 879 aa3.93□□□□□ -1.78
RNU4-61P-201ENST00000411243 H3BRB1 525 aa3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 VAV1P15498 845 aa3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 MAKP20794 623 aa3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 CTSKP43235 329 aa3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 RTP2Q5QGT7 225 aa3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 TMC1Q8TDI8 760 aa3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 PBXIP1Q96AQ6 731 aa3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 TUT1Q9H6E5 874 aaKnown RBP3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 RXFP1Q9HBX9 757 aa3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 CHST7Q9NS84 486 aa3.92□□□□□ -1.78
RNU4-61P-201ENST00000411243 CYP1A1P04798 512 aaPredicted RBP3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 CDK4P11802 303 aa3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 LMNB1P20700 586 aa3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 TUBA3CQ13748 450 aa3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 TSNAXIP1Q2TAA8 658 aa3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 PHLDB3Q6NSJ2 640 aa3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 TCTN3Q6NUS6 607 aa3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 TUBA3EQ6PEY2 450 aa3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 AEBP1Q8IUX7 1158 aa3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 GLYCTKQ8IVS8 523 aa3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 YTHDC1Q96MU7 727 aaKnown RBP3.91□□□□□ -1.78
RNU4-61P-201ENST00000411243 ITGA1P56199 1179 aa3.9□□□□□ -1.79
RNU4-61P-201ENST00000411243 CHMP4BP1P59074 171 aa3.9□□□□□ -1.79
RNU4-61P-201ENST00000411243 MICALCLQ6ZW33 695 aa3.9□□□□□ -1.79
RNU4-61P-201ENST00000411243 NAT16Q8N8M0 369 aa3.9□□□□□ -1.79
RNU4-61P-201ENST00000411243 PEX11GQ96HA9 241 aa3.9□□□□□ -1.79
RNU4-61P-201ENST00000411243 KIF2CQ99661 725 aa3.9□□□□□ -1.79
RNU4-61P-201ENST00000411243 SLC2A4RGQ9NR83 387 aa3.9□□□□□ -1.79
RNU4-61P-201ENST00000411243 CHURC1-FNTBB4DL54 471 aa3.89□□□□□ -1.79
RNU4-61P-201ENST00000411243 NBPF12Q5TAG4 269 aaPredicted RBP3.89□□□□□ -1.79
RNU4-61P-201ENST00000411243 SYCE2Q6PIF2 218 aa3.89□□□□□ -1.79
RNU4-61P-201ENST00000411243 CYP2R1Q6VVX0 501 aa3.89□□□□□ -1.79
RNU4-61P-201ENST00000411243 ULK2Q8IYT8 1036 aa3.89□□□□□ -1.79
RNU4-61P-201ENST00000411243 NLGN2Q8NFZ4 835 aa3.89□□□□□ -1.79
RNU4-61P-201ENST00000411243 PLEKHG4BQ96PX9 1271 aa3.89□□□□□ -1.79
RNU4-61P-201ENST00000411243 OSBPL7Q9BZF2 842 aa3.89□□□□□ -1.79
RNU4-61P-201ENST00000411243 NUDT5Q9UKK9 219 aa3.89□□□□□ -1.79
RNU4-61P-201ENST00000411243 FOXN1O15353 648 aa3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 POU3F3P20264 500 aaPredicted RBP3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 GPR162Q16538 588 aa3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 CRTC3Q6UUV7 619 aa3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 C1orf210Q8IVY1 113 aa3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 NETO2Q8NC67 525 aa3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 IL17DQ8TAD2 202 aa3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 TTPALQ9BTX7 342 aa3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 TMEM168Q9H0V1 697 aa3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 MIR1-1HGQ9H1L0 117 aa3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 KLHL3Q9UH77 587 aa3.88□□□□□ -1.79
RNU4-61P-201ENST00000411243 RGS13O14921 159 aa3.87□□□□□ -1.79
RNU4-61P-201ENST00000411243 UBOX5O94941 541 aa3.87□□□□□ -1.79
RNU4-61P-201ENST00000411243 ZBTB7AO95365 584 aa3.87□□□□□ -1.79
RNU4-61P-201ENST00000411243 ZNF37AP17032 561 aaPredicted RBP3.87□□□□□ -1.79
RNU4-61P-201ENST00000411243 GBP1P32455 592 aa3.87□□□□□ -1.79
RNU4-61P-201ENST00000411243 AGBL4Q5VU57 503 aa3.87□□□□□ -1.79
RNU4-61P-201ENST00000411243 PRAMEF18Q5VWM3 479 aa3.87□□□□□ -1.79
RNU4-61P-201ENST00000411243 AGMOQ6ZNB7 445 aa3.87□□□□□ -1.79
RNU4-61P-201ENST00000411243 CABP7Q86V35 215 aa3.87□□□□□ -1.79
RNU4-61P-201ENST00000411243 GNRHR2Q96P88 292 aa3.87□□□□□ -1.79
RNU4-61P-201ENST00000411243 PNMA6FA0A0J9YX94 578 aa3.86□□□□□ -1.79
RNU4-61P-201ENST00000411243 TMEM88BA6NKF7 163 aa3.86□□□□□ -1.79
RNU4-61P-201ENST00000411243 MEIS1O00470 390 aa3.86□□□□□ -1.79
RNU4-61P-201ENST00000411243 B4GALT4O60513 344 aa3.86□□□□□ -1.79
RNU4-61P-201ENST00000411243 CNOT4O95628 575 aaKnown RBP3.86□□□□□ -1.79
RNU4-61P-201ENST00000411243 COMTP21964 271 aa3.86□□□□□ -1.79
RNU4-61P-201ENST00000411243 GRM7Q14831 915 aa3.86□□□□□ -1.79
RNU4-61P-201ENST00000411243 SEC61A2Q9H9S3 476 aa3.86□□□□□ -1.79
RNU4-61P-201ENST00000411243 REV1Q9UBZ9 1251 aa3.86□□□□□ -1.79
RNU4-61P-201ENST00000411243 DNAJA2O60884 412 aa3.85□□□□□ -1.79
RNU4-61P-201ENST00000411243 ENOX2Q16206 610 aaKnown RBP3.85□□□□□ -1.79
RNU4-61P-201ENST00000411243 USP48Q86UV5 1035 aa3.85□□□□□ -1.79
RNU4-61P-201ENST00000411243 STK32CQ86UX6 486 aa3.85□□□□□ -1.79
RNU4-61P-201ENST00000411243 RBCK1Q9BYM8 510 aa3.85□□□□□ -1.79
RNU4-61P-201ENST00000411243 L2HGDHQ9H9P8 463 aa3.85□□□□□ -1.79
RNU4-61P-201ENST00000411243 PRR36Q9H6K5 1346 aa3.85□□□□□ -1.79
RNU4-61P-201ENST00000411243 GIPC1O14908 333 aa3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 FGF10O15520 208 aaPredicted RBP3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 NUDT3O95989 172 aa3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 GSTM1P09488 218 aa3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 MAPK7Q13164 816 aa3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 ETV3LQ6ZN32 361 aa3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 KLHL36Q8N4N3 616 aa3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 FAM26EQ8N5C1 309 aa3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 CLIP3Q96DZ5 547 aa3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 SLC12A9Q9BXP2 914 aa3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 FBLN5Q9UBX5 448 aa3.84□□□□□ -1.79
RNU4-61P-201ENST00000411243 Q6ZSN1 163 aa3.83□□□□□ -1.8
RNU4-61P-201ENST00000411243 GRASPQ7Z6J2 395 aaPredicted RBP3.83□□□□□ -1.8
RNU4-61P-201ENST00000411243 BCANQ96GW7 911 aa3.83□□□□□ -1.8
RNU4-61P-201ENST00000411243 BBC3Q96PG8 261 aaPredicted RBP3.83□□□□□ -1.8
RNU4-61P-201ENST00000411243 PDGFDQ9GZP0 370 aaPredicted RBP3.83□□□□□ -1.8
RNU4-61P-201ENST00000411243 GFOD1Q9NXC2 390 aa3.83□□□□□ -1.8
RNU4-61P-201ENST00000411243 TTF2Q9UNY4 1162 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms