RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CYP4F11Q9HBI6 524 aa-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 SLC30A1Q9Y6M5 507 aa-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP-0.2□□□□□ -2.44
RNU4-88P-201ENST00000411220 A0A1W2PP55 124 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 MYMKA6NI61 221 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 WTIPA6NIX2 430 aaPredicted RBP-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 IFITM10A6NMD0 228 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 H0Y858 1186 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 GTPBP1O00178 669 aaKnown RBP-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 LRIG2O94898 1065 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 CELA2AP08217 269 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 CKBP12277 381 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 TYRP1P17643 537 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 RASA1P20936 1047 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 PMLP29590 882 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 TUBA4AP68366 448 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 TAP1Q03518 808 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 DGKZQ13574 1117 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 ETFDHQ16134 617 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 NFE2Q16621 373 aaPredicted RBP-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 NBPF6Q5VWK0 638 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 PAQR3Q6TCH7 311 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 RHOUQ7L0Q8 258 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 KYQ8NBH2 561 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 CPA5Q8WXQ8 436 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 ALG3Q92685 438 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 RPL36ALQ969Q0 106 aaKnown RBP-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 LENG9Q96B70 501 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 HHIPL1Q96JK4 782 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 NBPF4Q96M43 638 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 MIPEPQ99797 713 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 ANLNQ9NQW6 1124 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 TLR9Q9NR96 1032 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 ABI2Q9NYB9 513 aaPredicted RBP-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 KANSL3Q9P2N6 904 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 SALL4Q9UJQ4 1053 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 GIT1Q9Y2X7 761 aa-0.21□□□□□ -2.44
RNU4-88P-201ENST00000411220 KRTAP23-1A1A580 65 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 UBAP1LF5GYI3 381 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 ATP9BO43861 1147 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 CYBBP04839 570 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 TGFB3P10600 412 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 PRR5P85299 388 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 POU4F1Q01851 419 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 PSME1Q06323 249 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 PCDH1Q08174 1060 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 CACNB2Q08289 660 aaPredicted RBP-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 SEMA3AQ14563 771 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 HSF5Q4G112 596 aaPredicted RBP-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 TTLL6Q8N841 843 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 PROKR1Q8TCW9 393 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 YTHDC1Q96MU7 727 aaKnown RBP-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 GORASP1Q9BQQ3 440 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 SPRR2GQ9BYE4 73 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 GPR62Q9BZJ7 368 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 KCNH6Q9H252 994 aa-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 CCDC86Q9H6F5 360 aaKnown RBP-0.22□□□□□ -2.44
RNU4-88P-201ENST00000411220 ADAM10O14672 748 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 ZNF862O60290 1169 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 SOCS5O75159 536 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 AP1G2O75843 785 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 CYP2C8P10632 490 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 ZNF28P17035 718 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 LINC00205P59089 165 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 ERVK-24P63145 666 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 FAAP100Q0VG06 881 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 KLF9Q13886 244 aaPredicted RBP-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 ZNF423Q2M1K9 1284 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 MAP7D1Q3KQU3 841 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 PRAMEF18Q5VWM3 479 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 SUSD1Q6UWL2 747 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 UBE3DQ7Z6J8 389 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 MYPOPQ86VE0 399 aaPredicted RBP-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 ADHFE1Q8IWW8 467 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 SYNE4Q8N205 404 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 KLHL36Q8N4N3 616 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 NUP43Q8NFH3 380 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 TRIM34Q9BYJ4 488 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 SLCO5A1Q9H2Y9 848 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 PCDH18Q9HCL0 1135 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 GJB4Q9NTQ9 266 aa-0.23□□□□□ -2.45
RNU4-88P-201ENST00000411220 A0A087WYN8 130 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 C21orf2O43822 256 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 ABHD16AO95870 558 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 TBX6O95947 436 aaPredicted RBP-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 DBHP09172 617 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 CXCR5P32302 372 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 CLK2P49760 499 aaKnown RBP-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 MTX3Q5HYI7 312 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 WAPLQ7Z5K2 1190 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 HAPLN4Q86UW8 402 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 SUPT20HQ8NEM7 779 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 LYZL4Q96KX0 146 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 CLEC4MQ9H2X3 399 aaPredicted RBP-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 L2HGDHQ9H9P8 463 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 ACSL6Q9UKU0 697 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 ZDHHC9Q9Y397 364 aa-0.24□□□□□ -2.45
RNU4-88P-201ENST00000411220 MUC6Q6W4X9 2439 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 IGKV6D-21A0A0A0MT36 114 aa-0.25□□□□□ -2.45
RNU4-88P-201ENST00000411220 TRIM66O15016 1216 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms