RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 DDX46Q7L014 1031 aaKnown RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 ARHGAP45Q92619 1136 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 XAGE2Q96GT9 111 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 UNC93B1Q9H1C4 597 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 GAKO14976 1311 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 SRGAP3O43295 1099 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 URI1O94763 535 aaPredicted RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 SDHBP21912 280 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 LMAN1P49257 510 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 MTX1Q13505 466 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 PDIA6Q15084 440 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 MTFR1Q15390 333 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 CREB3L3Q68CJ9 461 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 NAIF1Q69YI7 327 aaPredicted RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 USP38Q8NB14 1042 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 KAT14Q9H8E8 782 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 LZTFL1Q9NQ48 299 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 RCOR1Q9UKL0 485 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 LIMCH1Q9UPQ0 1083 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 SHANK1Q9Y566 2161 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 MBD3O95983 291 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 KLK7P49862 253 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 HAND2P61296 217 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 CAP1Q01518 475 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 GRAPQ13588 217 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 KSR1Q8IVT5 923 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 GRAPLQ8TC17 118 aaPredicted RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 HOOK2Q96ED9 719 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 NOL10Q9BSC4 688 aaKnown RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 OSBPL5Q9H0X9 879 aaPredicted RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 IKZF4Q9H2S9 585 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 LMCD1Q9NZU5 365 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 PRKAG3Q9UGI9 489 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 FZD1Q9UP38 647 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 LRBAP50851 2863 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 SPTAN1Q13813 2472 aaKnown RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 ABCA1O95477 2261 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 SLC27A2O14975 620 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 ECE2O60344 883 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 SLU7O95391 586 aaKnown RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 RHOXF2BP0C7M4 288 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 NMIQ13287 307 aaPredicted RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PTPN14Q15678 1187 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PTPROQ16827 1216 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 FBXO18Q8NFZ0 1043 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 RHOXF2Q9BQY4 288 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 CXorf56Q9H5V9 222 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 DDX20Q9UHI6 824 aaKnown RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 FUT4P22083 530 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 HNRNPH1P31943 449 aaKnown RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 CYP27A1Q02318 531 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 NR5A1Q13285 461 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PPIL2Q13356 520 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 BEND3Q5T5X7 828 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 CCDC155Q8N6L0 562 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 ZNF397Q8NF99 534 aaPredicted RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PARD3BQ8TEW8 1205 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 TBC1D5Q92609 795 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PHKBQ93100 1093 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 HPS3Q969F9 1004 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 DBNDD2Q9BQY9 259 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PPP1R12BO60237 982 aaPredicted RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 LRRN2O75325 713 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 REC8O95072 547 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 HMGCRP04035 888 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PDHBP11177 359 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 CD1EP15812 388 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 FLT3P36888 993 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PTPAQ15257 358 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 NPY5RQ15761 445 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 TPD52L1Q16890 204 aaPredicted RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 TBC1D25Q3MII6 688 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 CCDC82Q8N4S0 544 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 MMS19Q96T76 1030 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PTPN18Q99952 460 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 CHPF2Q9P2E5 772 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 MAPK8IP1Q9UQF2 711 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 DOCK5Q9H7D0 1870 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 MED23Q9ULK4 1368 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 BAZ2AQ9UIF9 1905 aaKnown RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 SOBPA7XYQ1 873 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 GYPCP04921 128 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 INHAP05111 366 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 ZNF18P17022 549 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 CXCR5P32302 372 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 TBX2Q13207 712 aaPredicted RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PNOCQ13519 176 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 RASIP1Q5U651 963 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 FNDC1Q4ZHG4 1894 aaPredicted RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 CCDC171Q6TFL3 1326 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 ROBO3Q96MS0 1386 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 PTCD1O75127 700 aaKnown RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 USP17L8P0C7I0 530 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 MYL6BP14649 208 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 IRAK1P51617 712 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 IRX3P78415 501 aaPredicted RBP3.57□□□□□ -1.84
RGPD3-202ENST00000409886 ATP8B2P98198 1209 aa3.57□□□□□ -1.84
RGPD3-202ENST00000409886 SLC35G1Q2M3R5 365 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms