RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 CCDC47Q96A33 483 aaKnown RBP16.94■□□□□ 0.3
LYSMD4-204ENST00000409796 AK8Q96MA6 479 aa16.94■□□□□ 0.3
LYSMD4-204ENST00000409796 PCMTD1Q96MG8 357 aaPredicted RBP16.94■□□□□ 0.3
LYSMD4-204ENST00000409796 C7orf25Q9BPX7 421 aa16.94■□□□□ 0.3
LYSMD4-204ENST00000409796 ZNHIT6Q9NWK9 470 aaKnown RBP16.94■□□□□ 0.3
LYSMD4-204ENST00000409796 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
LYSMD4-204ENST00000409796 EIF3CLB5ME19 914 aaKnown RBP16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 NT5C2P49902 561 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 RETREG2Q8NC44 543 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 EIF3CQ99613 913 aaKnown RBP16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 NOC4LQ9BVI4 516 aaKnown RBP16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 NARFQ9UHQ1 456 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 TRIM66O15016 1216 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 NONOQ15233 471 aaKnown RBP eCLIP16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 KRT25Q7Z3Z0 450 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 AMOTL1Q8IY63 956 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 HPS3Q969F9 1004 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 RASSF4Q9H2L5 321 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 DUSP10Q9Y6W6 482 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 CNTNAP4Q9C0A0 1308 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 TECP42680 631 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 CYP27A1Q02318 531 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 FAM114A1Q8IWE2 563 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 CCDC170Q8IYT3 715 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 EHBP1Q8NDI1 1231 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 WDR66Q8TBY9 1149 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
LYSMD4-204ENST00000409796 SMCO2A6NFE2 343 aa16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 PHACTR2O75167 634 aa16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 GOLGA5Q8TBA6 731 aa16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 FAM71BQ8TC56 605 aa16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 ZFP91Q96JP5 570 aaPredicted RBP16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 LZTS2Q9BRK4 669 aa16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 MMTAG2Q9BU76 263 aaKnown RBP16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 SPZ1Q9BXG8 430 aa16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 MYO1CO00159 1063 aa16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 BAG3O95817 575 aa16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 KIAA0895Q8NCT3 520 aa16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 EFCC1Q9HA90 598 aa16.92■□□□□ 0.3
LYSMD4-204ENST00000409796 RGL2O15211 777 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 ZNF185O15231 689 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 IPO7O95373 1038 aaKnown RBP16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 ACTN2P35609 894 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 PPP4CP60510 307 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 HSP90B2PQ58FF3 399 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 MEX3CQ5U5Q3 659 aaKnown RBP16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 ZNF772Q68DY9 489 aaPredicted RBP16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 TPTE2Q6XPS3 522 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 NEK8Q86SG6 692 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 ZSCAN29Q8IWY8 852 aaPredicted RBP16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 PURBQ96QR8 312 aaKnown RBP16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 ERGIC2Q96RQ1 377 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 SEMA6BQ9H3T3 888 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 C6orf50Q9HD87 102 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 MACROD2A1Z1Q3 448 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 PDE2AO00408 941 aaPredicted RBP16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 ZNF263O14978 683 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 TNNT3P45378 269 aaPredicted RBP16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 CKAP4Q07065 602 aaKnown RBP16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 USP17L2Q6R6M4 530 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 C10orf67Q8IYJ2 551 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 ACBD3Q9H3P7 528 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 ANKIB1Q9P2G1 1089 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 SNED1Q8TER0 1413 aa16.91■□□□□ 0.3
LYSMD4-204ENST00000409796 MYH10P35580 1976 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 PLEKP08567 350 aaPredicted RBP16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 NOP2P46087 812 aaKnown RBP16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 GSTO1P78417 241 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 BARGINQ6ZT62 677 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 PTF1AQ7RTS3 328 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 GPR101Q96P66 508 aaPredicted RBP16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 VAT1LQ9HCJ6 419 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 SLC39A2Q9NP94 309 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 TNRC6CQ9HCJ0 1690 aaKnown RBP16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 A0A1W2PQJ5 194 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 ZMYND10O75800 440 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 FIGNQ5HY92 759 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 CNNM4Q6P4Q7 775 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 KRT26Q7Z3Y9 468 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 CAGE1Q8TC20 777 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 TBCKQ8TEA7 893 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 EYA3Q99504 573 aa16.9■□□□□ 0.3
LYSMD4-204ENST00000409796 DDX60LQ5H9U9 1706 aaKnown RBP16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 ANO9A1A5B4 782 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 ZPR1O75312 459 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 IDEP14735 1019 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 GNA11P29992 359 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 PPP1R2P41236 205 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 CDK8P49336 464 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 VAV2P52735 878 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 AMPD3Q01432 767 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 FKBP15Q5T1M5 1219 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 RPGRIP1Q96KN7 1286 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 VIPAS39Q9H9C1 493 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 MED4Q9NPJ6 270 aa16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 BIN2Q9UBW5 565 aaPredicted RBP16.89■□□□□ 0.29
LYSMD4-204ENST00000409796 LRWD1Q9UFC0 647 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms