RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 OPTNQ96CV9 577 aa14.16□□□□□ -0.14
CHMP3-204ENST00000409727 P2RX7Q99572 595 aaKnown RBP14.16□□□□□ -0.14
CHMP3-204ENST00000409727 ANO3Q9BYT9 981 aa14.16□□□□□ -0.14
CHMP3-204ENST00000409727 PANK2Q9BZ23 570 aa14.16□□□□□ -0.14
CHMP3-204ENST00000409727 SLC38A10Q9HBR0 1119 aa14.16□□□□□ -0.14
CHMP3-204ENST00000409727 MRPL11Q9Y3B7 192 aaKnown RBP14.16□□□□□ -0.14
CHMP3-204ENST00000409727 VWA5AO00534 786 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 NEMFO60524 1076 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 ZBED4O75132 1171 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 ZNF202O95125 648 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 SYKP43405 635 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 PPATQ06203 517 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 MAP3K11Q16584 847 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 USP49Q70CQ1 688 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 FAM13BQ9NYF5 915 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 KCNH3Q9ULD8 1083 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 ABCB11O95342 1321 aa14.15□□□□□ -0.14
CHMP3-204ENST00000409727 GOLGA6L3A6NEY3 463 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 SPDYE5A6NIY4 337 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 SLC37A4O43826 429 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 EDIL3O43854 480 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 COG2Q14746 738 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 LRSAM1Q6UWE0 723 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 CATSPERGQ6ZRH7 1159 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 PDILTQ8N807 584 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 ERCC4Q92889 916 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-204ENST00000409727 EPSTI1Q96J88 318 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 UIMC1Q96RL1 719 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 GCOM1H8Y6P7 765 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-204ENST00000409727 NFIBO00712 420 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 LETM1O95202 739 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-204ENST00000409727 POLR2MP0CAP2 368 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 AP3B2Q13367 1082 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 SH3D19Q5HYK7 790 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 DTHD1Q6ZMT9 781 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
CHMP3-204ENST00000409727 SYMPKQ92797 1274 aaKnown RBP14.14□□□□□ -0.15
CHMP3-204ENST00000409727 SDF4Q9BRK5 362 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 HPSEQ9Y251 543 aa14.14□□□□□ -0.15
CHMP3-204ENST00000409727 ABCB7O75027 752 aa14.13□□□□□ -0.15
CHMP3-204ENST00000409727 CELF2O95319 508 aaKnown RBP14.13□□□□□ -0.15
CHMP3-204ENST00000409727 OR52Z1P0C646 297 aa14.13□□□□□ -0.15
CHMP3-204ENST00000409727 CDC25AP30304 524 aa14.13□□□□□ -0.15
CHMP3-204ENST00000409727 MKRN3Q13064 507 aaKnown RBP14.13□□□□□ -0.15
CHMP3-204ENST00000409727 PLS1Q14651 629 aa14.13□□□□□ -0.15
CHMP3-204ENST00000409727 MUM1L1Q5H9M0 696 aa14.13□□□□□ -0.15
CHMP3-204ENST00000409727 SLC10A4Q96EP9 437 aa14.13□□□□□ -0.15
CHMP3-204ENST00000409727 DDX25Q9UHL0 483 aaKnown RBP14.13□□□□□ -0.15
CHMP3-204ENST00000409727 A0A0G2JLL6 359 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-204ENST00000409727 POLR2DO15514 142 aaKnown RBP14.12□□□□□ -0.15
CHMP3-204ENST00000409727 UBXN2AP68543 259 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 ARHGAP4P98171 946 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 CALCRLQ16602 461 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 ARL6IP4Q66PJ3 421 aaKnown RBP14.12□□□□□ -0.15
CHMP3-204ENST00000409727 PRRT2Q7Z6L0 340 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-204ENST00000409727 GJA10Q969M2 543 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 MORC2Q9Y6X9 1032 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-204ENST00000409727 MYH7BA7E2Y1 1941 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 PARP14Q460N5 1801 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 SPDYE16A6NNV3 312 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-204ENST00000409727 PIK3CDO00329 1044 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 PEX10O60683 326 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 TXKP42681 527 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 PPIL2Q13356 520 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 LONRF3Q496Y0 759 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 LDLRAD1Q5T700 205 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 SNRNP48Q6IEG0 339 aaKnown RBP14.12□□□□□ -0.15
CHMP3-204ENST00000409727 CLEC4DQ8WXI8 215 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 TSPY26PQ9H489 355 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 GBA2Q9HCG7 927 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-204ENST00000409727 RIPK3Q9Y572 518 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 PTPRFP10586 1907 aa14.12□□□□□ -0.15
CHMP3-204ENST00000409727 PP2D1A8MPX8 630 aa14.11□□□□□ -0.15
CHMP3-204ENST00000409727 LAD1O00515 517 aa14.11□□□□□ -0.15
CHMP3-204ENST00000409727 MARCH6O60337 910 aa14.11□□□□□ -0.15
CHMP3-204ENST00000409727 FOSP01100 380 aaPredicted RBP14.11□□□□□ -0.15
CHMP3-204ENST00000409727 GJA5P36382 358 aa14.11□□□□□ -0.15
CHMP3-204ENST00000409727 TECP42680 631 aa14.11□□□□□ -0.15
CHMP3-204ENST00000409727 TMEM132BQ14DG7 1078 aa14.11□□□□□ -0.15
CHMP3-204ENST00000409727 DHX58Q96C10 678 aa14.11□□□□□ -0.15
CHMP3-204ENST00000409727 TRERF1Q96PN7 1200 aa14.11□□□□□ -0.15
CHMP3-204ENST00000409727 HOXC10Q9NYD6 342 aa14.11□□□□□ -0.15
CHMP3-204ENST00000409727 A0A087X0B3 334 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 FAM237AA0A1B0GTK4 181 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 CXCL11O14625 94 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 DEKP35659 375 aaKnown RBP14.1□□□□□ -0.15
CHMP3-204ENST00000409727 LONP1P36776 959 aaKnown RBP14.1□□□□□ -0.15
CHMP3-204ENST00000409727 ZRSR1Q15695 479 aaKnown RBP14.1□□□□□ -0.15
CHMP3-204ENST00000409727 PRR16Q569H4 304 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 MCTP2Q6DN12 878 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 PPP4R3AQ6IN85 833 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 RNF214Q8ND24 703 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 CNNM3Q8NE01 707 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 ZFP91Q96JP5 570 aaPredicted RBP14.1□□□□□ -0.15
CHMP3-204ENST00000409727 RNF146Q9NTX7 359 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 RLFQ13129 1914 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 COL11A1P12107 1806 aaPredicted RBP14.1□□□□□ -0.15
CHMP3-204ENST00000409727 A0A087WWV3 80 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 FSD2A1L4K1 749 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 FDX1P10109 184 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms