RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PLXNA1Q9UIW2 1896 aa22.95■■□□□ 1.27
PDLIM2-207ENST00000409417 OPLAHO14841 1288 aa22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 SNAI1O95863 264 aaPredicted RBP22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 EN2P19622 333 aaPredicted RBP22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 ADD1P35611 737 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 PRAMEF19Q5SWL8 479 aa22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 ARMCX2Q7L311 632 aa22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 TBC1D5Q92609 795 aa22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 ZNF274Q96GC6 653 aaPredicted RBP22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 PURBQ96QR8 312 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 ASTN1O14525 1302 aa22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 MYH6P13533 1939 aa22.95■■□□□ 1.26
PDLIM2-207ENST00000409417 LOC102724159A0A0B4J2E5 919 aa22.94■■□□□ 1.26
PDLIM2-207ENST00000409417 CAPN2P17655 700 aa22.94■■□□□ 1.26
PDLIM2-207ENST00000409417 GHRHRQ02643 423 aa22.94■■□□□ 1.26
PDLIM2-207ENST00000409417 PWP2Q15269 919 aaKnown RBP22.94■■□□□ 1.26
PDLIM2-207ENST00000409417 SAMD3Q8N6K7 520 aa22.94■■□□□ 1.26
PDLIM2-207ENST00000409417 C22orf23Q9BZE7 217 aa22.94■■□□□ 1.26
PDLIM2-207ENST00000409417 CRISPLD2Q9H0B8 497 aa22.94■■□□□ 1.26
PDLIM2-207ENST00000409417 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.94■■□□□ 1.26
PDLIM2-207ENST00000409417 MAP3K20Q9NYL2 800 aaKnown RBP22.94■■□□□ 1.26
PDLIM2-207ENST00000409417 CNTNAP5Q8WYK1 1306 aa22.94■■□□□ 1.26
PDLIM2-207ENST00000409417 SEPT4O43236 478 aa22.93■■□□□ 1.26
PDLIM2-207ENST00000409417 MSCO60682 206 aa22.93■■□□□ 1.26
PDLIM2-207ENST00000409417 CNGA1P29973 690 aa22.93■■□□□ 1.26
PDLIM2-207ENST00000409417 RGS19P49795 217 aa22.93■■□□□ 1.26
PDLIM2-207ENST00000409417 ANKRD1Q15327 319 aa22.93■■□□□ 1.26
PDLIM2-207ENST00000409417 DNERQ8NFT8 737 aa22.93■■□□□ 1.26
PDLIM2-207ENST00000409417 SYTL5Q8TDW5 730 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-207ENST00000409417 SHISA4Q96DD7 197 aa22.93■■□□□ 1.26
PDLIM2-207ENST00000409417 UPF2Q9HAU5 1272 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-207ENST00000409417 V9GY48 417 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-207ENST00000409417 hCG_1642624A0A1W2PR95 340 aa22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 CFBP00751 764 aa22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 RBM25P49756 843 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 HSD17B4P51659 736 aa22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 NEK4P51957 841 aa22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 LHX8Q68G74 356 aa22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 RBBP6Q7Z6E9 1792 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 MORC4Q8TE76 937 aa22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 LARP6Q9BRS8 491 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 ABHD16BQ9H3Z7 469 aa22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 DDX20Q9UHI6 824 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 TFRCP02786 760 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 ZNF865P0CJ78 1059 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 ALDH5A1P51649 535 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-207ENST00000409417 GCOM1H8Y6P7 765 aaPredicted RBP22.91■■□□□ 1.26
PDLIM2-207ENST00000409417 POLR2MP0CAP2 368 aa22.91■■□□□ 1.26
PDLIM2-207ENST00000409417 AK2P54819 239 aa22.91■■□□□ 1.26
PDLIM2-207ENST00000409417 CCT2P78371 535 aaKnown RBP22.91■■□□□ 1.26
PDLIM2-207ENST00000409417 ACVR2BQ13705 512 aa22.91■■□□□ 1.26
PDLIM2-207ENST00000409417 NCOA5Q9HCD5 579 aaKnown RBP22.91■■□□□ 1.26
PDLIM2-207ENST00000409417 COL20A1Q9P218 1284 aa22.91■■□□□ 1.26
PDLIM2-207ENST00000409417 OGDHLQ9ULD0 1010 aa22.91■■□□□ 1.26
PDLIM2-207ENST00000409417 NTRK3Q16288 839 aa22.9■■□□□ 1.26
PDLIM2-207ENST00000409417 HEATR3Q7Z4Q2 680 aa22.9■■□□□ 1.26
PDLIM2-207ENST00000409417 NSUN6Q8TEA1 469 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-207ENST00000409417 MPHOSPH6Q99547 160 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-207ENST00000409417 KIF2CQ99661 725 aa22.9■■□□□ 1.26
PDLIM2-207ENST00000409417 TPCN1Q9ULQ1 816 aa22.9■■□□□ 1.26
PDLIM2-207ENST00000409417 MKI67P46013 3256 aaKnown RBP22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 B4DLN1 442 aa22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 IFNAR1P17181 557 aa22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 HOXA13P31271 388 aaPredicted RBP22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 MRPL12P52815 198 aaKnown RBP22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 TAAR1Q96RJ0 339 aa22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 RMDN3Q96TC7 470 aa22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 KATNBL1Q9H079 304 aa22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 RBM27Q9P2N5 1060 aaKnown RBP22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 ZHX1Q9UKY1 873 aaPredicted RBP22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 DDX49Q9Y6V7 483 aaKnown RBP22.89■■□□□ 1.25
PDLIM2-207ENST00000409417 hCG_1984214I3L0E3 225 aa22.88■■□□□ 1.25
PDLIM2-207ENST00000409417 EDNRBP24530 442 aa22.88■■□□□ 1.25
PDLIM2-207ENST00000409417 ZNF713Q8N859 430 aaPredicted RBP22.88■■□□□ 1.25
PDLIM2-207ENST00000409417 GPKOWQ92917 476 aaPredicted RBP eCLIP22.88■■□□□ 1.25
PDLIM2-207ENST00000409417 FAM184BQ9ULE4 1060 aa22.88■■□□□ 1.25
PDLIM2-207ENST00000409417 LCTP09848 1927 aa22.88■■□□□ 1.25
PDLIM2-207ENST00000409417 CPLX1O14810 134 aa22.87■■□□□ 1.25
PDLIM2-207ENST00000409417 PRPF3O43395 683 aaKnown RBP22.87■■□□□ 1.25
PDLIM2-207ENST00000409417 AKR1A1P14550 325 aa22.87■■□□□ 1.25
PDLIM2-207ENST00000409417 STK3Q13188 491 aa22.87■■□□□ 1.25
PDLIM2-207ENST00000409417 WWC2Q6AWC2 1192 aa22.87■■□□□ 1.25
PDLIM2-207ENST00000409417 IWS1Q96ST2 819 aa22.87■■□□□ 1.25
PDLIM2-207ENST00000409417 PSTPIP2Q9H939 334 aa22.87■■□□□ 1.25
PDLIM2-207ENST00000409417 PIK3CDO00329 1044 aa22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 PFKFB2O60825 505 aa22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 PDE4DQ08499 809 aa22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 PFKFB3Q16875 520 aaPredicted RBP22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 ARHGEF16Q5VV41 709 aa22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 ANKLE1Q8NAG6 615 aa22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 PHKBQ93100 1093 aa22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 RNF26Q9BY78 433 aaPredicted RBP22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 BACH2Q9BYV9 841 aa22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 SLKQ9H2G2 1235 aaPredicted RBP22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 VTA1Q9NP79 307 aa22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 BARHL2Q9NY43 387 aa22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 MCM3APO60318 1980 aa22.86■■□□□ 1.25
PDLIM2-207ENST00000409417 RARBP10826 455 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 SCG2P13521 617 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 AKAP17AQ02040 695 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms