RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 NLRP14Q86W24 1093 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 IQCKQ8N0W5 287 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 EIF1ADQ8N9N8 165 aaKnown RBP11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 MYCBPAPQ8TBZ2 947 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 MICAL1Q8TDZ2 1067 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 CCDC114Q96M63 670 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 PAIP2Q9BPZ3 127 aaKnown RBP11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 KDM4CQ9H3R0 1056 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 CPSF2Q9P2I0 782 aaKnown RBP11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 MAN1B1Q9UKM7 699 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 SAMM50Q9Y512 469 aa11.83□□□□□ -0.52
NIF3L1-204ENST00000409357 HMGB1P1B2RPK0 211 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 MPHOSPH10O00566 681 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 RAD17O75943 681 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 GSTA1P08263 222 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 EPS15P42566 896 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 RPS6KA3P51812 740 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 EIF6P56537 245 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 CXCL9Q07325 125 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 PNOCQ13519 176 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 CCDC38Q502W7 563 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 EAPPQ56P03 285 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 NCAPH2Q6IBW4 605 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 DRAXINQ8NBI3 349 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 TBC1D16Q8TBP0 767 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 CCT8L2Q96SF2 557 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 MMS19Q96T76 1030 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 CDC5LQ99459 802 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 DBNDD1Q9H9R9 158 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 KCNQ5Q9NR82 932 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 HACL1Q9UJ83 578 aa11.82□□□□□ -0.52
NIF3L1-204ENST00000409357 IQCA1LA6NCM1 817 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 ABLIM1O14639 778 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 GBP2P32456 591 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 EPHX2P34913 555 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 GCKP35557 465 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 MDH1P40925 334 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 SPAG1Q07617 926 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 TTMPQ5BVD1 217 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 EPHA10Q5JZY3 1008 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 TTC19Q6DKK2 380 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 CCDC170Q8IYT3 715 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 SUPT20HQ8NEM7 779 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 EAF2Q96CJ1 260 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 CALR3Q96L12 384 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 RUFY1Q96T51 708 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 EHD4Q9H223 541 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 SLC24A3Q9HC58 644 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 HELLSQ9NRZ9 838 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 KCNH3Q9ULD8 1083 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 ZNRF3Q9ULT6 936 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 ZNF646O15015 1829 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 RTL9Q8NET4 1388 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 PAEPP09466 180 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 APLP1P51693 650 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 KRT83P78385 493 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 FOXO4P98177 505 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 FMR1Q06787 632 aaKnown RBP eCLIP11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 DOK7Q18PE1 504 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 MFN1Q8IWA4 741 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 ZFAND2BQ8WV99 257 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 LMBR1Q8WVP7 490 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 PURBQ96QR8 312 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 MAP3K14Q99558 947 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 PLA2G12BQ9BX93 195 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 ABHD10Q9NUJ1 306 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 ANKIB1Q9P2G1 1089 aa11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 LIMA1Q9UHB6 759 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 EPN1Q9Y6I3 576 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-204ENST00000409357 PSME4Q14997 1843 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 SH2B2O14492 632 aaPredicted RBP11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 UFL1O94874 794 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 GYPCP04921 128 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 ITGA6P23229 1130 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 CCNG1P51959 295 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 G3BP1Q13283 466 aaKnown RBP eCLIP11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 PDCLQ13371 301 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 PDIA5Q14554 519 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 POSTNQ15063 836 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 LONRF3Q496Y0 759 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 ANKRD20A8PQ5CZ79 823 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 CHADLQ6NUI6 762 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 STOX1Q6ZVD7 989 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 SND1Q7KZF4 910 aaKnown RBP eCLIP11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 CCDC155Q8N6L0 562 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 DNAJC5GQ8N7S2 189 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 RASSF8Q8NHQ8 419 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 VPS33BQ9H267 617 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
NIF3L1-204ENST00000409357 CFAP73A6NFT4 308 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 GRM8O00222 908 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 SMNDC1O75940 238 aaKnown RBP eCLIP11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 NDUFA10O95299 355 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 CSF1RP07333 972 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 CDC27P30260 824 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 GMPSP49915 693 aaPredicted RBP11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 ERVK-24P63145 666 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms