RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 SNAI1O95863 264 aaPredicted RBP9.21□□□□□ -0.94
LSM5-202ENST00000409292 TTLL1O95922 423 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 ZFYP08048 801 aaPredicted RBP9.21□□□□□ -0.94
LSM5-202ENST00000409292 PFKMP08237 780 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 SUPT20HL2P0C7V6 817 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 ACTN1P12814 892 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 CDK7P50613 346 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 PDE4BQ07343 736 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 SKIV2LQ15477 1246 aaKnown RBP9.21□□□□□ -0.94
LSM5-202ENST00000409292 TKFCQ3LXA3 575 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 SBK1Q52WX2 424 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 ARMCX2Q7L311 632 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 FAM160B2Q86V87 743 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 LENG1Q96BZ8 264 aaPredicted RBP9.21□□□□□ -0.94
LSM5-202ENST00000409292 UHRF1Q96T88 793 aaPredicted RBP9.21□□□□□ -0.94
LSM5-202ENST00000409292 C1QTNF1Q9BXJ1 281 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 PBX4Q9BYU1 374 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 LRRCC1Q9C099 1032 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 UPF3AQ9H1J1 476 aaKnown RBP9.21□□□□□ -0.94
LSM5-202ENST00000409292 HIPK3Q9H422 1215 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 RAVER2Q9HCJ3 691 aaKnown RBP9.21□□□□□ -0.94
LSM5-202ENST00000409292 SLC4A7Q9Y6M7 1214 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 TTC28Q96AY4 2481 aa9.21□□□□□ -0.94
LSM5-202ENST00000409292 MYO9BQ13459 2157 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 PLXNA1Q9UIW2 1896 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 DNAJC25-GNG10A0A024R161 153 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 ZBBXA8MT70 800 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 TSPY3P0CV98 308 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 TSPY8P0CW00 308 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 ACRP10323 421 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 RLBP1P12271 317 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 BMP3P12645 472 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 STAT2P52630 851 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 CCDC85BQ15834 202 aaPredicted RBP9.2□□□□□ -0.94
LSM5-202ENST00000409292 SLFN13Q68D06 897 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 CCSAPQ6IQ19 270 aaPredicted RBP9.2□□□□□ -0.94
LSM5-202ENST00000409292 FAM126BQ8IXS8 530 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 STK11IPQ8N1F8 1099 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 REPS2Q8NFH8 660 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 PANK1Q8TE04 598 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 ADAMTS19Q8TE59 1207 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 HERVK_113Q902F9 699 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 FAM122AQ96E09 287 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 NUP88Q99567 741 aaPredicted RBP9.2□□□□□ -0.94
LSM5-202ENST00000409292 SLC38A10Q9HBR0 1119 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 HOMER2Q9NSB8 354 aa9.2□□□□□ -0.94
LSM5-202ENST00000409292 ADD3Q9UEY8 706 aaKnown RBP9.2□□□□□ -0.94
LSM5-202ENST00000409292 B4DLN1 442 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 KIF28PB7ZC32 967 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 RASA1P20936 1047 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 CYP2C18P33260 490 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 SLC1A4P43007 532 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 MRPL12P52815 198 aaKnown RBP9.19□□□□□ -0.94
LSM5-202ENST00000409292 PTGDRQ13258 359 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 ITGA7Q13683 1181 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 FSCN1Q16658 493 aaKnown RBP9.19□□□□□ -0.94
LSM5-202ENST00000409292 PPP2R2DQ66LE6 453 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 IQSEC1Q6DN90 963 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 CXCL17Q6UXB2 119 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.19□□□□□ -0.94
LSM5-202ENST00000409292 TLK2Q86UE8 772 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 CCDC144CPQ8IYA2 1237 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 MICALL1Q8N3F8 863 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 USP38Q8NB14 1042 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 GMCL1P1Q8NEA9 526 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 APPBP2Q92624 585 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 NKX2-4Q9H2Z4 354 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 ECHDC1Q9NTX5 307 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 RNF146Q9NTX7 359 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 POLR3EQ9NVU0 708 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 PNMA2Q9UL42 364 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 Q9Y3F1 56 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 RAD50Q92878 1312 aa9.19□□□□□ -0.94
LSM5-202ENST00000409292 A0A0C4DFX4 3053 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 MYADML2A6NDP7 307 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 GRXCR1A8MXD5 290 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 TMEM232C9JQI7 657 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 DYNC1LI2O43237 492 aaPredicted RBP9.18□□□□□ -0.94
LSM5-202ENST00000409292 RNF40O75150 1001 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 COL11A1P12107 1806 aaPredicted RBP9.18□□□□□ -0.94
LSM5-202ENST00000409292 RASIP1Q5U651 963 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 OTOP2Q7RTS6 562 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 RETREG2Q8NC44 543 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 STAG1Q8WVM7 1258 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 MKL1Q969V6 931 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 STRBPQ96SI9 672 aaKnown RBP9.18□□□□□ -0.94
LSM5-202ENST00000409292 PUS7LQ9H0K6 701 aaKnown RBP9.18□□□□□ -0.94
LSM5-202ENST00000409292 MTMR4Q9NYA4 1195 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 BAZ2AQ9UIF9 1905 aaKnown RBP9.18□□□□□ -0.94
LSM5-202ENST00000409292 NOD1Q9Y239 953 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 RIPK3Q9Y572 518 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 PCDHA11Q9Y5I1 949 aa9.18□□□□□ -0.94
LSM5-202ENST00000409292 ERC2O15083 957 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 RNF113AO15541 343 aaKnown RBP9.17□□□□□ -0.94
LSM5-202ENST00000409292 GPAA1O43292 621 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 CD4P01730 458 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 ALAS1P13196 640 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 ATP2A2P16615 1042 aaKnown RBP9.17□□□□□ -0.94
LSM5-202ENST00000409292 RFC2P35250 354 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms