RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 NPHP3-ACAD11A0A0J9YXS1 232 aa9.2□□□□□ -0.94
PTPN12-202ENST00000407343 USP2O75604 605 aaPredicted RBP9.2□□□□□ -0.94
PTPN12-202ENST00000407343 LTBRP36941 435 aa9.2□□□□□ -0.94
PTPN12-202ENST00000407343 GABREP78334 506 aa9.2□□□□□ -0.94
PTPN12-202ENST00000407343 C21orf62-AS1Q17RA5 79 aa9.2□□□□□ -0.94
PTPN12-202ENST00000407343 ARTNQ5T4W7 220 aa9.2□□□□□ -0.94
PTPN12-202ENST00000407343 RSPO2Q6UXX9 243 aaPredicted RBP9.2□□□□□ -0.94
PTPN12-202ENST00000407343 PTPRN2Q92932 1015 aa9.2□□□□□ -0.94
PTPN12-202ENST00000407343 JMJD8Q96S16 334 aa9.2□□□□□ -0.94
PTPN12-202ENST00000407343 GPR27Q9NS67 375 aa9.2□□□□□ -0.94
PTPN12-202ENST00000407343 C7orf72A4D263 438 aa9.19□□□□□ -0.94
PTPN12-202ENST00000407343 FAM83GA6ND36 823 aa9.19□□□□□ -0.94
PTPN12-202ENST00000407343 PPP1R11O60927 126 aaPredicted RBP9.19□□□□□ -0.94
PTPN12-202ENST00000407343 KIR2DL1P43626 348 aaPredicted RBP9.19□□□□□ -0.94
PTPN12-202ENST00000407343 KIR2DL2P43627 348 aaPredicted RBP9.19□□□□□ -0.94
PTPN12-202ENST00000407343 GYS2P54840 703 aa9.19□□□□□ -0.94
PTPN12-202ENST00000407343 ERVFC1P60507 584 aa9.19□□□□□ -0.94
PTPN12-202ENST00000407343 KCNAB2Q13303 367 aa9.19□□□□□ -0.94
PTPN12-202ENST00000407343 MAMDC2Q7Z304 686 aaPredicted RBP9.19□□□□□ -0.94
PTPN12-202ENST00000407343 DPF3Q92784 378 aa9.19□□□□□ -0.94
PTPN12-202ENST00000407343 DIO2Q92813 273 aa9.19□□□□□ -0.94
PTPN12-202ENST00000407343 IPO9Q96P70 1041 aaKnown RBP9.19□□□□□ -0.94
PTPN12-202ENST00000407343 PHF20Q9BVI0 1012 aa9.19□□□□□ -0.94
PTPN12-202ENST00000407343 CDIP1Q9H305 208 aa9.19□□□□□ -0.94
PTPN12-202ENST00000407343 TRBV23OR9-2A0A075B6M9 112 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 HPXP02790 462 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 SDSP20132 328 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 DUSP4Q13115 394 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 LAPTM5Q13571 262 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 PLCL1Q15111 1095 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 ZNF792Q3KQV3 632 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 TIGD5Q53EQ6 642 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 FGD2Q7Z6J4 655 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 NAT16Q8N8M0 369 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 AGBL5Q8NDL9 886 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 PDZD8Q8NEN9 1154 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 PI4K2BQ8TCG2 481 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 NINJ1Q92982 152 aa9.18□□□□□ -0.94
PTPN12-202ENST00000407343 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.18□□□□□ -0.94
PTPN12-202ENST00000407343 DNAJC8O75937 253 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-202ENST00000407343 TBC1D8O95759 1140 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 HK2P52789 917 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 KIR3DS1Q14943 382 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 NR0B2Q15466 257 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 HSF5Q4G112 596 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-202ENST00000407343 TM4SF20Q53R12 229 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 HLA-DQA1Q5Y7H0 255 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 IQCEQ6IPM2 695 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 BRAPQ7Z569 592 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 TP53INP2Q8IXH6 220 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 ABI1Q8IZP0 508 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 ANKS4BQ8N8V4 417 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 PLCD4Q9BRC7 762 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 FBLN5Q9UBX5 448 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 NDOR1Q9UHB4 597 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 SFMBT1Q9UHJ3 866 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 CTNND2Q9UQB3 1225 aa9.17□□□□□ -0.94
PTPN12-202ENST00000407343 A0A1W2PQ45 241 aaPredicted RBP9.16□□□□□ -0.94
PTPN12-202ENST00000407343 A0A1W2PQY0 241 aa9.16□□□□□ -0.94
PTPN12-202ENST00000407343 CANXP27824 592 aaKnown RBP9.16□□□□□ -0.94
PTPN12-202ENST00000407343 GDNFP39905 211 aa9.16□□□□□ -0.94
PTPN12-202ENST00000407343 NLRP10Q86W26 655 aa9.16□□□□□ -0.94
PTPN12-202ENST00000407343 Q8N1Y9 231 aa9.16□□□□□ -0.94
PTPN12-202ENST00000407343 SHISA4Q96DD7 197 aa9.16□□□□□ -0.94
PTPN12-202ENST00000407343 ZFYVE21Q9BQ24 234 aa9.16□□□□□ -0.94
PTPN12-202ENST00000407343 PLAAQ9Y263 795 aa9.16□□□□□ -0.94
PTPN12-202ENST00000407343 NRDCO43847 1150 aa9.15□□□□□ -0.94
PTPN12-202ENST00000407343 GPR85P60893 370 aa9.15□□□□□ -0.94
PTPN12-202ENST00000407343 LBX2Q6XYB7 198 aa9.15□□□□□ -0.94
PTPN12-202ENST00000407343 CBLL1Q75N03 491 aa9.15□□□□□ -0.94
PTPN12-202ENST00000407343 NLGN2Q8NFZ4 835 aa9.15□□□□□ -0.94
PTPN12-202ENST00000407343 EFCAB14O75071 495 aa9.14□□□□□ -0.95
PTPN12-202ENST00000407343 RASGRP1O95267 797 aa9.14□□□□□ -0.95
PTPN12-202ENST00000407343 CRTAMO95727 393 aa9.14□□□□□ -0.95
PTPN12-202ENST00000407343 MSL3P1P0C860 447 aa9.14□□□□□ -0.95
PTPN12-202ENST00000407343 GP2P55259 537 aaKnown RBP9.14□□□□□ -0.95
PTPN12-202ENST00000407343 RTP1P59025 263 aa9.14□□□□□ -0.95
PTPN12-202ENST00000407343 CHRNEQ04844 493 aa9.14□□□□□ -0.95
PTPN12-202ENST00000407343 CEP128Q6ZU80 1094 aa9.14□□□□□ -0.95
PTPN12-202ENST00000407343 NIM1KQ8IY84 436 aa9.14□□□□□ -0.95
PTPN12-202ENST00000407343 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTPN12-202ENST00000407343 ASIC4Q96FT7 647 aa9.14□□□□□ -0.95
PTPN12-202ENST00000407343 MTA3Q9BTC8 594 aa9.14□□□□□ -0.95
PTPN12-202ENST00000407343 PPARGC1AQ9UBK2 798 aaKnown RBP9.14□□□□□ -0.95
PTPN12-202ENST00000407343 A0A087X0B3 334 aa9.13□□□□□ -0.95
PTPN12-202ENST00000407343 ARVCFO00192 962 aa9.13□□□□□ -0.95
PTPN12-202ENST00000407343 KCNA6P17658 529 aa9.13□□□□□ -0.95
PTPN12-202ENST00000407343 TRHRP34981 398 aaPredicted RBP9.13□□□□□ -0.95
PTPN12-202ENST00000407343 MVKQ03426 396 aa9.13□□□□□ -0.95
PTPN12-202ENST00000407343 DHX37Q8IY37 1157 aaKnown RBP9.13□□□□□ -0.95
PTPN12-202ENST00000407343 IFNL3Q8IZI9 196 aa9.13□□□□□ -0.95
PTPN12-202ENST00000407343 IMPACTQ9P2X3 320 aa9.13□□□□□ -0.95
PTPN12-202ENST00000407343 ACSL6Q9UKU0 697 aa9.13□□□□□ -0.95
PTPN12-202ENST00000407343 PCDHA9Q9Y5H5 950 aa9.13□□□□□ -0.95
PTPN12-202ENST00000407343 OAS3Q9Y6K5 1087 aaKnown RBP9.13□□□□□ -0.95
PTPN12-202ENST00000407343 TCRBV16S1A1N1A0A5B0 115 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 FITM1A5D6W6 292 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 AQP7O14520 342 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 IRS4O14654 1257 aaPredicted RBP9.12□□□□□ -0.95
PTPN12-202ENST00000407343 PSPNO60542 156 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms