RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 PAK1Q13153 545 aa18.23■□□□□ 0.51
CDK11B-204ENST00000407249 MTRQ99707 1265 aa18.23■□□□□ 0.51
CDK11B-204ENST00000407249 LRRC4BQ9NT99 713 aa18.23■□□□□ 0.51
CDK11B-204ENST00000407249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.22■□□□□ 0.51
CDK11B-204ENST00000407249 hCG_1642624A0A1W2PR95 340 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 KCNJ18B7U540 433 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 PSMD14O00487 310 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 PRPF3O43395 683 aaKnown RBP18.22■□□□□ 0.51
CDK11B-204ENST00000407249 MNAT1P51948 309 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 ATP2C1P98194 919 aaPredicted RBP18.22■□□□□ 0.51
CDK11B-204ENST00000407249 KCNJ12Q14500 433 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 TNFRSF25Q93038 417 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 MKRN1Q9UHC7 482 aaKnown RBP18.22■□□□□ 0.51
CDK11B-204ENST00000407249 GUCA1BQ9UMX6 200 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 CCDC88AQ3V6T2 1871 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 AARSP49588 968 aaKnown RBP eCLIP18.22■□□□□ 0.51
CDK11B-204ENST00000407249 PTGDRQ13258 359 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 PDXDC2PQ6P474 469 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 FAM204AQ9H8W3 233 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 VEZTQ9HBM0 779 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 TRIM10Q9UDY6 481 aa18.22■□□□□ 0.51
CDK11B-204ENST00000407249 V9GY48 417 aaPredicted RBP18.22■□□□□ 0.51
CDK11B-204ENST00000407249 TPD52L2O43399 206 aaKnown RBP18.21■□□□□ 0.51
CDK11B-204ENST00000407249 RPS6KA3P51812 740 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 USP14P54578 494 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 NPY5RQ15761 445 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 TTC38Q5R3I4 469 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 CRNKL1Q9BZJ0 848 aaKnown RBP18.21■□□□□ 0.51
CDK11B-204ENST00000407249 GOPCQ9HD26 462 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 MYH8P13535 1937 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 FGRP09769 529 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 SLC5A9Q2M3M2 681 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 PRR5LQ6MZQ0 368 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 LRRC31Q6UY01 552 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 WDR66Q8TBY9 1149 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 NELFBQ8WX92 580 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 HAUS4Q9H6D7 363 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 CHCHD3Q9NX63 227 aaKnown RBP18.21■□□□□ 0.51
CDK11B-204ENST00000407249 LAMB1P07942 1786 aa18.21■□□□□ 0.51
CDK11B-204ENST00000407249 PAX3P23760 479 aa18.2■□□□□ 0.5
CDK11B-204ENST00000407249 USP8P40818 1118 aa18.2■□□□□ 0.5
CDK11B-204ENST00000407249 MECOMQ03112 1051 aa18.2■□□□□ 0.5
CDK11B-204ENST00000407249 UBXN1Q04323 297 aa18.2■□□□□ 0.5
CDK11B-204ENST00000407249 PDCD2Q16342 344 aaPredicted RBP18.2■□□□□ 0.5
CDK11B-204ENST00000407249 CRY2Q49AN0 593 aa18.2■□□□□ 0.5
CDK11B-204ENST00000407249 RPGRQ92834 1020 aaKnown RBP18.2■□□□□ 0.5
CDK11B-204ENST00000407249 ATP8A2Q9NTI2 1148 aa18.2■□□□□ 0.5
CDK11B-204ENST00000407249 GTPBP6O43824 516 aaPredicted RBP18.2■□□□□ 0.5
CDK11B-204ENST00000407249 RNF40O75150 1001 aa18.2■□□□□ 0.5
CDK11B-204ENST00000407249 SYF2O95926 243 aaKnown RBP18.2■□□□□ 0.5
CDK11B-204ENST00000407249 ICA1Q05084 483 aa18.2■□□□□ 0.5
CDK11B-204ENST00000407249 ZNF658Q5TYW1 1059 aaPredicted RBP18.2■□□□□ 0.5
CDK11B-204ENST00000407249 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
CDK11B-204ENST00000407249 ENAHQ8N8S7 591 aaPredicted RBP18.2■□□□□ 0.5
CDK11B-204ENST00000407249 TRIM6Q9C030 488 aaPredicted RBP18.2■□□□□ 0.5
CDK11B-204ENST00000407249 HDAC6Q9UBN7 1215 aa18.2■□□□□ 0.5
CDK11B-204ENST00000407249 TTC26A0AVF1 554 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 WTIPA6NIX2 430 aaPredicted RBP18.19■□□□□ 0.5
CDK11B-204ENST00000407249 ENC1O14682 589 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 PLEKHA8P1O95397 391 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 GYS1P13807 737 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 KLRK1P26718 216 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 ELF1P32519 619 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 ZNF804AQ7Z570 1209 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 RPUSD2Q8IZ73 545 aaKnown RBP18.19■□□□□ 0.5
CDK11B-204ENST00000407249 OR8K1Q8NGG5 319 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 CTCFLQ8NI51 663 aaPredicted RBP18.19■□□□□ 0.5
CDK11B-204ENST00000407249 SDR42E1Q8WUS8 393 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 A1CFQ9NQ94 594 aaKnown RBP18.19■□□□□ 0.5
CDK11B-204ENST00000407249 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 MICALL1Q8N3F8 863 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 RBM17Q96I25 401 aaKnown RBP18.19■□□□□ 0.5
CDK11B-204ENST00000407249 MMS19Q96T76 1030 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 DNAJC7Q99615 494 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 RMI1Q9H9A7 625 aa18.19■□□□□ 0.5
CDK11B-204ENST00000407249 SPATS2LQ9NUQ6 558 aaKnown RBP18.19■□□□□ 0.5
CDK11B-204ENST00000407249 MINDY4BA8MYZ0 360 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 PRPF6O94906 941 aaKnown RBP18.18■□□□□ 0.5
CDK11B-204ENST00000407249 MCM3P25205 808 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 GSTO1P78417 241 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 MFSD4BQ5TF39 518 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 IRF2BP1Q8IU81 584 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 EFCAB13Q8IY85 973 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 DRAXINQ8NBI3 349 aaPredicted RBP18.18■□□□□ 0.5
CDK11B-204ENST00000407249 ZNF384Q8TF68 577 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 PYM1Q9BRP8 204 aaKnown RBP18.18■□□□□ 0.5
CDK11B-204ENST00000407249 ANKIB1Q9P2G1 1089 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 ARPP21Q9UBL0 812 aaPredicted RBP18.18■□□□□ 0.5
CDK11B-204ENST00000407249 SAR1BQ9Y6B6 198 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 DLEC1Q9Y238 1755 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 SMIM22K7EJ46 135 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 ATP1A1P05023 1023 aaKnown RBP18.18■□□□□ 0.5
CDK11B-204ENST00000407249 GCFC2P16383 781 aaKnown RBP18.18■□□□□ 0.5
CDK11B-204ENST00000407249 SBK1Q52WX2 424 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 PAPD7Q5XG87 772 aaKnown RBP18.18■□□□□ 0.5
CDK11B-204ENST00000407249 ZSCAN10Q96SZ4 725 aaPredicted RBP18.18■□□□□ 0.5
CDK11B-204ENST00000407249 HPCAL4Q9UM19 191 aa18.18■□□□□ 0.5
CDK11B-204ENST00000407249 H7C1D1 291 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 PRCPP42785 496 aa18.17■□□□□ 0.5
CDK11B-204ENST00000407249 DYNLL1P63167 89 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms