RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 USP17L11C9JVI0 530 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 USP17L18D6R9N7 530 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 USP17L22D6RA61 530 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 USP17L17D6RBQ6 530 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 USP17L19D6RCP7 530 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 USP17L20D6RJB6 530 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 USP17L24Q0WX57 530 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 USP17L6PQ6QN14 398 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 VSTM4Q8IW00 320 aa27.78■■■□□ 2.04
DNMT3A-206ENST00000406659 PDIA5Q14554 519 aa27.77■■■□□ 2.04
DNMT3A-206ENST00000406659 TPD52L1Q16890 204 aaPredicted RBP27.77■■■□□ 2.04
DNMT3A-206ENST00000406659 MCTP2Q6DN12 878 aa27.77■■■□□ 2.04
DNMT3A-206ENST00000406659 SPICE1Q8N0Z3 855 aa27.77■■■□□ 2.04
DNMT3A-206ENST00000406659 MYOZ2Q9NPC6 264 aa27.77■■■□□ 2.04
DNMT3A-206ENST00000406659 TMX2Q9Y320 296 aa27.77■■■□□ 2.04
DNMT3A-206ENST00000406659 MARCH6O60337 910 aa27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 SFPQP23246 707 aaKnown RBP eCLIP27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 ECE1P42892 770 aa27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 CCZ1BP86790 482 aa27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 CCZ1P86791 482 aaPredicted RBP27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 SEMA3FQ13275 785 aa27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 KCNB1Q14721 858 aa27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 NBPF9Q3BBW0 867 aa27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 MMTAG2Q9BU76 263 aaKnown RBP27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 WNT10BO00744 389 aa27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 MIGA2Q7L4E1 593 aa27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 ACER1Q8TDN7 264 aa27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 RWDD2AQ9UIY3 292 aa27.76■■■□□ 2.03
DNMT3A-206ENST00000406659 FER1L6Q2WGJ9 1857 aa27.75■■■□□ 2.03
DNMT3A-206ENST00000406659 MMP14P50281 582 aa27.75■■■□□ 2.03
DNMT3A-206ENST00000406659 AMPD3Q01432 767 aa27.75■■■□□ 2.03
DNMT3A-206ENST00000406659 USH1GQ495M9 461 aa27.75■■■□□ 2.03
DNMT3A-206ENST00000406659 ARMCX5Q6P1M9 558 aa27.75■■■□□ 2.03
DNMT3A-206ENST00000406659 LRRC15Q8TF66 581 aa27.75■■■□□ 2.03
DNMT3A-206ENST00000406659 CCDC47Q96A33 483 aaKnown RBP27.75■■■□□ 2.03
DNMT3A-206ENST00000406659 ANO3Q9BYT9 981 aa27.75■■■□□ 2.03
DNMT3A-206ENST00000406659 NFKBIEO00221 500 aa27.74■■■□□ 2.03
DNMT3A-206ENST00000406659 NRDCO43847 1150 aa27.74■■■□□ 2.03
DNMT3A-206ENST00000406659 USP11P51784 963 aa27.74■■■□□ 2.03
DNMT3A-206ENST00000406659 PAK1Q13153 545 aa27.74■■■□□ 2.03
DNMT3A-206ENST00000406659 AP3B2Q13367 1082 aa27.74■■■□□ 2.03
DNMT3A-206ENST00000406659 KMT5BQ4FZB7 885 aa27.74■■■□□ 2.03
DNMT3A-206ENST00000406659 CDK5RAP3Q96JB5 506 aa27.74■■■□□ 2.03
DNMT3A-206ENST00000406659 STAT2P52630 851 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 CDAN1Q8IWY9 1227 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 INTS13Q9NVM9 706 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 PRR12Q9ULL5 1215 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 MYH7BA7E2Y1 1941 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 MEIS2O14770 477 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 KLRC4O43908 158 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 CAP2P40123 477 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 TERF1P54274 439 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 CDKAL1Q5VV42 579 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 NELFBQ8WX92 580 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 BCS1LQ9Y276 419 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 GDAQ9Y2T3 454 aa27.73■■■□□ 2.03
DNMT3A-206ENST00000406659 PRCPP42785 496 aa27.72■■■□□ 2.03
DNMT3A-206ENST00000406659 TRAF1Q13077 416 aa27.72■■■□□ 2.03
DNMT3A-206ENST00000406659 KRT79Q5XKE5 535 aa27.72■■■□□ 2.03
DNMT3A-206ENST00000406659 C7orf25Q9BPX7 421 aa27.72■■■□□ 2.03
DNMT3A-206ENST00000406659 SH2D4AQ9H788 454 aa27.72■■■□□ 2.03
DNMT3A-206ENST00000406659 STK17AQ9UEE5 414 aa27.72■■■□□ 2.03
DNMT3A-206ENST00000406659 SHTN1A0MZ66 631 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 RHOBTB3O94955 611 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 RPS12P25398 132 aaKnown RBP27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 GRB10Q13322 594 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 FAM83BQ5T0W9 1011 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 PGAP2Q9UHJ9 254 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 FOSP01100 380 aaPredicted RBP27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 ZNF280AP59817 542 aaPredicted RBP27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 STIM1Q13586 685 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 KIAA1755Q5JYT7 1200 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 SV2BQ7L1I2 683 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 HAS1Q92839 578 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 CTAGE1Q96RT6 745 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 TRIM9Q9C026 710 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 CD2APQ9Y5K6 639 aa27.71■■■□□ 2.03
DNMT3A-206ENST00000406659 BRCA1P38398 1863 aaKnown RBP27.7■■■□□ 2.03
DNMT3A-206ENST00000406659 POTEMA6NI47 508 aa27.7■■■□□ 2.02
DNMT3A-206ENST00000406659 R3HDM1Q15032 1099 aaKnown RBP27.7■■■□□ 2.02
DNMT3A-206ENST00000406659 ADSSL1Q8N142 457 aa27.7■■■□□ 2.02
DNMT3A-206ENST00000406659 SNX29Q8TEQ0 813 aa27.7■■■□□ 2.02
DNMT3A-206ENST00000406659 CHURC1Q8WUH1 139 aa27.7■■■□□ 2.02
DNMT3A-206ENST00000406659 VCPKMTQ9H867 229 aa27.7■■■□□ 2.02
DNMT3A-206ENST00000406659 PCDHA12Q9UN75 941 aa27.7■■■□□ 2.02
DNMT3A-206ENST00000406659 MAPK8IP1Q9UQF2 711 aa27.7■■■□□ 2.02
DNMT3A-206ENST00000406659 CYP3A7-CYP3A51PA0A087WV96 503 aa27.69■■■□□ 2.02
DNMT3A-206ENST00000406659 A0A1B0GTH6 734 aa27.69■■■□□ 2.02
DNMT3A-206ENST00000406659 CYP3A7P24462 503 aa27.69■■■□□ 2.02
DNMT3A-206ENST00000406659 ASIC1P78348 528 aa27.69■■■□□ 2.02
DNMT3A-206ENST00000406659 MAP3K10Q02779 954 aa27.69■■■□□ 2.02
DNMT3A-206ENST00000406659 NR1I3Q14994 352 aa27.69■■■□□ 2.02
DNMT3A-206ENST00000406659 PNMA5Q96PV4 448 aa27.69■■■□□ 2.02
DNMT3A-206ENST00000406659 GTPBP4Q9BZE4 634 aaKnown RBP27.69■■■□□ 2.02
DNMT3A-206ENST00000406659 EXOC1Q9NV70 894 aa27.69■■■□□ 2.02
DNMT3A-206ENST00000406659 SPDYE3A6NKU9 549 aa27.68■■■□□ 2.02
DNMT3A-206ENST00000406659 COBLO75128 1261 aa27.68■■■□□ 2.02
DNMT3A-206ENST00000406659 RASA3Q14644 834 aa27.68■■■□□ 2.02
DNMT3A-206ENST00000406659 FILIP1LQ4L180 1135 aa27.68■■■□□ 2.02
DNMT3A-206ENST00000406659 MOXD1Q6UVY6 613 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms