RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TRAPPC8Q9Y2L5 1435 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 F8W8V4 182 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 SART1O43290 800 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 METTL23Q86XA0 190 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 MAGEF1Q9HAY2 307 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 SOS2Q07890 1332 aaPredicted RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 JAK2O60674 1132 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 APBA3O96018 575 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 RSRC2Q7L4I2 434 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 CACTINQ8WUQ7 758 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 A1BGP04217 495 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 SLC8A1P32418 973 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 CAPN12Q6ZSI9 719 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 LRRC47Q8N1G4 583 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 TRIM11Q96F44 468 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 FAM170AA1A519 330 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 GNGT2O14610 69 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 ASPHQ12797 758 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 ADAT2Q7Z6V5 191 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 PRPF38AQ8NAV1 312 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 PPWD1Q96BP3 646 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 NRBP2Q9NSY0 501 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 ATP2B4P23634 1241 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 EXOC3L4Q17RC7 722 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 DPP9Q86TI2 863 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 KLRF2D3W0D1 207 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 MCF2LO15068 1137 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
SMCR8-201ENST00000406438 IL1RL1Q01638 556 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 RNASELQ05823 741 aaKnown RBP13.11□□□□□ -0.31
SMCR8-201ENST00000406438 G2E3Q7L622 706 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 MICAL1Q8TDZ2 1067 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 POLA2Q14181 598 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 EFCAB13Q8IY85 973 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 RNF168Q8IYW5 571 aaPredicted RBP13.11□□□□□ -0.31
SMCR8-201ENST00000406438 PNMA1Q8ND90 353 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 CAPS2Q9BXY5 557 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 SNX25Q9H3E2 840 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 USP21Q9UK80 565 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 WDR17Q8IZU2 1322 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 RPS8P62241 208 aaKnown RBP13.11□□□□□ -0.31
SMCR8-201ENST00000406438 IGBP1P78318 339 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 LRCH2Q5VUJ6 765 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 TMTC3Q6ZXV5 915 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 CCDC127Q96BQ5 260 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 SUCLG2Q96I99 432 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 GDAP1L1Q96MZ0 367 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ATP8B3O60423 1300 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 LAD1O00515 517 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 TCP1P17987 556 aaKnown RBP13.11□□□□□ -0.31
SMCR8-201ENST00000406438 POLR2FP61218 127 aaKnown RBP13.11□□□□□ -0.31
SMCR8-201ENST00000406438 IL9RQ01113 521 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 CFAP61Q8NHU2 1237 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 STAG1Q8WVM7 1258 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ATP6V1E2Q96A05 226 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ATP10BO94823 1461 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ATP5JP18859 108 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ADAM9Q13443 819 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ANKRD20A4Q4UJ75 823 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ANKRD20A8PQ5CZ79 823 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ANKRD20A2Q5SQ80 823 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ANKRD20A1Q5TYW2 823 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 TRIM42Q8IWZ5 723 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMCR8-201ENST00000406438 RIPOR2Q9Y4F9 1068 aa13.11□□□□□ -0.31
SMCR8-201ENST00000406438 ATP7AQ04656 1500 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 NEURL1BA8MQ27 555 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 ERVV-2B6SEH9 535 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 USP17L12C9JPN9 530 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 USP17L21D6R901 530 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 NVLO15381 856 aaKnown RBP13.1□□□□□ -0.31
SMCR8-201ENST00000406438 SUN1O94901 812 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 MED4Q9NPJ6 270 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 SERTAD1Q9UHV2 236 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 APOEP02649 317 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 LONP1P36776 959 aaKnown RBP13.1□□□□□ -0.31
SMCR8-201ENST00000406438 ATP1A2P50993 1020 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 SLC8A2Q9UPR5 921 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 NDUFB9Q9Y6M9 179 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 CAPN7Q9Y6W3 813 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 ZMYM3Q14202 1370 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 DDAH1O94760 285 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 KRT33BQ14525 404 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 JPH2Q9BR39 696 aaPredicted RBP13.1□□□□□ -0.31
SMCR8-201ENST00000406438 PPP1R9AQ9ULJ8 1098 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 HNRNPDLO14979 420 aaKnown RBP13.1□□□□□ -0.31
SMCR8-201ENST00000406438 CLTAP09496 248 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 ARHGEF37A1IGU5 675 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 MED7O43513 233 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 SCG2P13521 617 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 EEF1GP26641 437 aaKnown RBP13.1□□□□□ -0.31
SMCR8-201ENST00000406438 MIS18BP1Q6P0N0 1132 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 SLC38A10Q9HBR0 1119 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 SSH2Q76I76 1423 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 MYO1FO00160 1098 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms