RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 BIN2Q9UBW5 565 aaPredicted RBP18.41■□□□□ 0.54
GDPD3-202ENST00000406256 TPCN1Q9ULQ1 816 aa18.41■□□□□ 0.54
GDPD3-202ENST00000406256 PCDHA1Q9Y5I3 950 aa18.41■□□□□ 0.54
GDPD3-202ENST00000406256 POTEB2H3BUK9 544 aa18.4■□□□□ 0.54
GDPD3-202ENST00000406256 RNF207Q6ZRF8 634 aa18.4■□□□□ 0.54
GDPD3-202ENST00000406256 RRP36Q96EU6 259 aaKnown RBP18.4■□□□□ 0.54
GDPD3-202ENST00000406256 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.4■□□□□ 0.54
GDPD3-202ENST00000406256 SLC5A4Q9NY91 659 aa18.4■□□□□ 0.54
GDPD3-202ENST00000406256 MRPL11Q9Y3B7 192 aaKnown RBP18.4■□□□□ 0.54
GDPD3-202ENST00000406256 SYNGAP1Q96PV0 1343 aa18.39■□□□□ 0.53
GDPD3-202ENST00000406256 LARGE1O95461 756 aa18.39■□□□□ 0.53
GDPD3-202ENST00000406256 ZNF865P0CJ78 1059 aaPredicted RBP18.39■□□□□ 0.53
GDPD3-202ENST00000406256 HSD17B4P51659 736 aa18.39■□□□□ 0.53
GDPD3-202ENST00000406256 PPP2R5BQ15173 497 aa18.39■□□□□ 0.53
GDPD3-202ENST00000406256 PRAMEF19Q5SWL8 479 aa18.39■□□□□ 0.53
GDPD3-202ENST00000406256 MFSD14CQ5VZR4 134 aa18.39■□□□□ 0.53
GDPD3-202ENST00000406256 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
GDPD3-202ENST00000406256 MSL3Q8N5Y2 521 aaKnown RBP18.39■□□□□ 0.53
GDPD3-202ENST00000406256 SYTL5Q8TDW5 730 aaPredicted RBP18.39■□□□□ 0.53
GDPD3-202ENST00000406256 MORC4Q8TE76 937 aa18.39■□□□□ 0.53
GDPD3-202ENST00000406256 MAF1Q9H063 256 aa18.39■□□□□ 0.53
GDPD3-202ENST00000406256 RNF208Q9H0X6 261 aa18.39■□□□□ 0.53
GDPD3-202ENST00000406256 NAP1L2Q9ULW6 460 aaPredicted RBP18.39■□□□□ 0.53
GDPD3-202ENST00000406256 PTPDC1A2A3K4 754 aa18.38■□□□□ 0.53
GDPD3-202ENST00000406256 GJB1P08034 283 aa18.38■□□□□ 0.53
GDPD3-202ENST00000406256 NEK4P51957 841 aa18.38■□□□□ 0.53
GDPD3-202ENST00000406256 CCT2P78371 535 aaKnown RBP18.38■□□□□ 0.53
GDPD3-202ENST00000406256 LHX8Q68G74 356 aa18.38■□□□□ 0.53
GDPD3-202ENST00000406256 TBC1D32Q96NH3 1257 aa18.38■□□□□ 0.53
GDPD3-202ENST00000406256 HMX1Q9NP08 348 aaPredicted RBP18.38■□□□□ 0.53
GDPD3-202ENST00000406256 EDNRBP24530 442 aa18.37■□□□□ 0.53
GDPD3-202ENST00000406256 CALML3P27482 149 aa18.37■□□□□ 0.53
GDPD3-202ENST00000406256 ALDH5A1P51649 535 aaPredicted RBP18.37■□□□□ 0.53
GDPD3-202ENST00000406256 PKN1Q16512 942 aa18.37■□□□□ 0.53
GDPD3-202ENST00000406256 WWC2Q6AWC2 1192 aa18.37■□□□□ 0.53
GDPD3-202ENST00000406256 ARMCX2Q7L311 632 aa18.37■□□□□ 0.53
GDPD3-202ENST00000406256 GPKOWQ92917 476 aaPredicted RBP eCLIP18.37■□□□□ 0.53
GDPD3-202ENST00000406256 CRISPLD2Q9H0B8 497 aa18.37■□□□□ 0.53
GDPD3-202ENST00000406256 ALPK3Q96L96 1907 aa18.36■□□□□ 0.53
GDPD3-202ENST00000406256 ADCY6O43306 1168 aa18.36■□□□□ 0.53
GDPD3-202ENST00000406256 CAPN15O75808 1086 aa18.36■□□□□ 0.53
GDPD3-202ENST00000406256 IFNAR1P17181 557 aa18.36■□□□□ 0.53
GDPD3-202ENST00000406256 EN2P19622 333 aaPredicted RBP18.36■□□□□ 0.53
GDPD3-202ENST00000406256 GJA8P48165 433 aa18.36■□□□□ 0.53
GDPD3-202ENST00000406256 ST3GAL1Q11201 340 aa18.36■□□□□ 0.53
GDPD3-202ENST00000406256 SCRN1Q12765 414 aa18.36■□□□□ 0.53
GDPD3-202ENST00000406256 DEFB118Q96PH6 123 aa18.36■□□□□ 0.53
GDPD3-202ENST00000406256 TAAR1Q96RJ0 339 aa18.36■□□□□ 0.53
GDPD3-202ENST00000406256 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.36■□□□□ 0.53
GDPD3-202ENST00000406256 NRBP1Q9UHY1 535 aa18.36■□□□□ 0.53
GDPD3-202ENST00000406256 V9GY48 417 aaPredicted RBP18.36■□□□□ 0.53
GDPD3-202ENST00000406256 PFKFB2O60825 505 aa18.35■□□□□ 0.53
GDPD3-202ENST00000406256 PPFIA3O75145 1194 aa18.35■□□□□ 0.53
GDPD3-202ENST00000406256 MNX1P50219 401 aaPredicted RBP18.35■□□□□ 0.53
GDPD3-202ENST00000406256 STK3Q13188 491 aa18.35■□□□□ 0.53
GDPD3-202ENST00000406256 ME3Q16798 604 aa18.35■□□□□ 0.53
GDPD3-202ENST00000406256 MCF2L2Q86YR7 1114 aa18.35■□□□□ 0.53
GDPD3-202ENST00000406256 U2AF1L4Q8WU68 220 aaKnown RBP18.35■□□□□ 0.53
GDPD3-202ENST00000406256 PHKBQ93100 1093 aa18.35■□□□□ 0.53
GDPD3-202ENST00000406256 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
GDPD3-202ENST00000406256 PDE4DIPQ5VU43 2346 aa18.35■□□□□ 0.53
GDPD3-202ENST00000406256 CCDC196A0A1B0GTZ2 297 aa18.34■□□□□ 0.53
GDPD3-202ENST00000406256 STXBP3O00186 592 aa18.34■□□□□ 0.53
GDPD3-202ENST00000406256 MEIS2O14770 477 aa18.34■□□□□ 0.53
GDPD3-202ENST00000406256 PRPF3O43395 683 aaKnown RBP18.34■□□□□ 0.53
GDPD3-202ENST00000406256 SGPL1O95470 568 aa18.34■□□□□ 0.53
GDPD3-202ENST00000406256 CFBP00751 764 aa18.34■□□□□ 0.53
GDPD3-202ENST00000406256 HOXA13P31271 388 aaPredicted RBP18.34■□□□□ 0.53
GDPD3-202ENST00000406256 DNERQ8NFT8 737 aa18.34■□□□□ 0.53
GDPD3-202ENST00000406256 TMEM106CQ9BVX2 250 aa18.34■□□□□ 0.53
GDPD3-202ENST00000406256 LOC102724159A0A0B4J2E5 919 aa18.33■□□□□ 0.53
GDPD3-202ENST00000406256 SEPT4O43236 478 aa18.33■□□□□ 0.53
GDPD3-202ENST00000406256 CTDNEP1O95476 244 aa18.33■□□□□ 0.53
GDPD3-202ENST00000406256 RGS19P49795 217 aa18.33■□□□□ 0.53
GDPD3-202ENST00000406256 TRAF1Q13077 416 aa18.33■□□□□ 0.53
GDPD3-202ENST00000406256 PWP2Q15269 919 aaKnown RBP18.33■□□□□ 0.53
GDPD3-202ENST00000406256 PFKFB3Q16875 520 aaPredicted RBP18.33■□□□□ 0.53
GDPD3-202ENST00000406256 UBE2Q1Q7Z7E8 422 aa18.33■□□□□ 0.53
GDPD3-202ENST00000406256 SAMD3Q8N6K7 520 aa18.33■□□□□ 0.53
GDPD3-202ENST00000406256 RNF26Q9BY78 433 aaPredicted RBP18.33■□□□□ 0.53
GDPD3-202ENST00000406256 MAP3K20Q9NYL2 800 aaKnown RBP18.33■□□□□ 0.53
GDPD3-202ENST00000406256 DDX20Q9UHI6 824 aaKnown RBP18.33■□□□□ 0.53
GDPD3-202ENST00000406256 OGDHLQ9ULD0 1010 aa18.33■□□□□ 0.53
GDPD3-202ENST00000406256 FRMPD4Q14CM0 1322 aa18.33■□□□□ 0.52
GDPD3-202ENST00000406256 MYH7BA7E2Y1 1941 aa18.33■□□□□ 0.52
GDPD3-202ENST00000406256 ASB14A6NK59 587 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 PIK3CDO00329 1044 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 ADAMTS3O15072 1205 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 DTNBO60941 627 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 ACVR2BQ13705 512 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 ANKRD1Q15327 319 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 TAPT1Q6NXT6 567 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 NOL8Q76FK4 1167 aaKnown RBP18.32■□□□□ 0.52
GDPD3-202ENST00000406256 HEATR3Q7Z4Q2 680 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
GDPD3-202ENST00000406256 ABHD16BQ9H3Z7 469 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 PXMP2Q9NR77 195 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 BARHL2Q9NY43 387 aa18.32■□□□□ 0.52
GDPD3-202ENST00000406256 ADD3Q9UEY8 706 aaKnown RBP18.32■□□□□ 0.52
GDPD3-202ENST00000406256 CD2BP2O95400 341 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms