RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 DHTKD1Q96HY7 919 aaPredicted RBP11.04□□□□□ -0.64
MSH2-202ENST00000406134 MMS19Q96T76 1030 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 EYA3Q99504 573 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 POLLQ9UGP5 575 aa11.04□□□□□ -0.64
MSH2-202ENST00000406134 MYMKA6NI61 221 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 POLR3GO15318 223 aaPredicted RBP11.03□□□□□ -0.64
MSH2-202ENST00000406134 CCNE1P24864 410 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 CENPPQ6IPU0 288 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 CCDC148Q8NFR7 591 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 OR8K1Q8NGG5 319 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 TBCKQ8TEA7 893 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 FAM163AQ96GL9 167 aaPredicted RBP11.03□□□□□ -0.64
MSH2-202ENST00000406134 CNOT6LQ96LI5 555 aaKnown RBP11.03□□□□□ -0.64
MSH2-202ENST00000406134 MKNK2Q9HBH9 465 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 CCNL1Q9UK58 526 aaPredicted RBP11.03□□□□□ -0.64
MSH2-202ENST00000406134 MYO6Q9UM54 1294 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 STX8Q9UNK0 236 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 SMCO2A6NFE2 343 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 ZPR1O75312 459 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 TECP42680 631 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 WHAMMP3Q1A5X7 153 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 WDR93Q6P2C0 686 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 AK8Q96MA6 479 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 ERGIC2Q96RQ1 377 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 MTMR7Q9Y216 660 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 ESYT2A0FGR8 921 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 HNRNPH3P31942 346 aaKnown RBP11.03□□□□□ -0.64
MSH2-202ENST00000406134 GNAQP50148 359 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 LRRC55Q6ZSA7 311 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.03□□□□□ -0.64
MSH2-202ENST00000406134 CREBRFQ8IUR6 639 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 NEK11Q8NG66 645 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 FGFBP2Q9BYJ0 223 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 CUEDC2Q9H467 287 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 DDX4Q9NQI0 724 aaKnown RBP11.03□□□□□ -0.64
MSH2-202ENST00000406134 EXOC1Q9NV70 894 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 ANKIB1Q9P2G1 1089 aa11.03□□□□□ -0.64
MSH2-202ENST00000406134 SLURP2P0DP57 97 aa11.02□□□□□ -0.64
MSH2-202ENST00000406134 SMARCA1P28370 1054 aa11.02□□□□□ -0.64
MSH2-202ENST00000406134 KIF4BQ2VIQ3 1234 aa11.02□□□□□ -0.64
MSH2-202ENST00000406134 FNBP4Q8N3X1 1017 aaPredicted RBP11.02□□□□□ -0.64
MSH2-202ENST00000406134 MAGEF1Q9HAY2 307 aa11.02□□□□□ -0.64
MSH2-202ENST00000406134 RTCBQ9Y3I0 505 aaKnown RBP11.02□□□□□ -0.64
MSH2-202ENST00000406134 ERICH4A6NGS2 130 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 LCA5LO95447 670 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 TDP2O95551 362 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 RHOXF2BP0C7M4 288 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 TUBB2AQ13885 445 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 FIGNQ5HY92 759 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 NEK8Q86SG6 692 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 ZBTB9Q96C00 473 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 TRIM47Q96LD4 638 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 RHOXF2Q9BQY4 288 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 TUBB2BQ9BVA1 445 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 NHEJ1Q9H9Q4 299 aaPredicted RBP11.02□□□□□ -0.65
MSH2-202ENST00000406134 ARHGAP20Q9P2F6 1191 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 SALL4Q9UJQ4 1053 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 A0A1W2PQJ5 194 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 ZNF185O15231 689 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 MYBL2P10244 700 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 UBA7P41226 1012 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 DNM2P50570 870 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.653e-6■■■□□ 15.6
MSH2-202ENST00000406134 NAPAP54920 295 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 TMEM119Q4V9L6 283 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 CNNM4Q6P4Q7 775 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 CSGALNACT2Q8N6G5 542 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 IPO4Q8TEX9 1081 aaKnown RBP11.02□□□□□ -0.65
MSH2-202ENST00000406134 LZTS2Q9BRK4 669 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 UBA5Q9GZZ9 404 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 PDE11AQ9HCR9 933 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 BIN2Q9UBW5 565 aaPredicted RBP11.02□□□□□ -0.65
MSH2-202ENST00000406134 GUCA1BQ9UMX6 200 aa11.02□□□□□ -0.65
MSH2-202ENST00000406134 FRMPD2Q68DX3 1309 aaPredicted RBP11.01□□□□□ -0.65
MSH2-202ENST00000406134 CDK17Q00537 523 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 NONOQ15233 471 aaKnown RBP eCLIP11.01□□□□□ -0.65
MSH2-202ENST00000406134 ASTE1Q2TB18 679 aaPredicted RBP11.01□□□□□ -0.65
MSH2-202ENST00000406134 ZCWPW2Q504Y3 356 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 KRT25Q7Z3Z0 450 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 HAS1Q92839 578 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 GJA10Q969M2 543 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 EIF3CLB5ME19 914 aaKnown RBP11.01□□□□□ -0.65
MSH2-202ENST00000406134 PDE4DQ08499 809 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 JAKMIP3Q5VZ66 844 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 KRT26Q7Z3Y9 468 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 ZNF444Q8N0Y2 327 aaPredicted RBP11.01□□□□□ -0.65
MSH2-202ENST00000406134 BAP1Q92560 729 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 EIF3CQ99613 913 aaKnown RBP11.01□□□□□ -0.65
MSH2-202ENST00000406134 LUC7L2Q9Y383 392 aaKnown RBP11.01□□□□□ -0.65
MSH2-202ENST00000406134 POTEMA6NI47 508 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 PSMA7O14818 248 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 HNRNPH2P55795 449 aaKnown RBP11.01□□□□□ -0.65
MSH2-202ENST00000406134 GSTO1P78417 241 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 CCDC178Q5BJE1 867 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 ZNF804AQ7Z570 1209 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 CERS5Q8N5B7 392 aa11.01□□□□□ -0.65
MSH2-202ENST00000406134 SMCR8Q8TEV9 937 aaPredicted RBP11.01□□□□□ -0.65
MSH2-202ENST00000406134 COA7Q96BR5 231 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms