RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 HOXC6P09630 235 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 ADCYAP1R1P41586 468 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 METAP2P50579 478 aaKnown RBP eCLIP12.24□□□□□ -0.45
RPAIN-204ENST00000405578 TLE2Q04725 743 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 APOBRQ0VD83 1088 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 GRB14Q14449 540 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 GRM4Q14833 912 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 SYDE2Q5VT97 1194 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 LBX2Q6XYB7 198 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 FANCBQ8NB91 859 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 TIFAQ96CG3 184 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 GAS2L1Q99501 681 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-204ENST00000405578 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 FBXO28Q9NVF7 368 aa12.24□□□□□ -0.45
RPAIN-204ENST00000405578 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-204ENST00000405578 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-204ENST00000405578 PALM3A6NDB9 673 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-204ENST00000405578 SPDYE16A6NNV3 312 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-204ENST00000405578 GOLGA8AA7E2F4 631 aa12.23□□□□□ -0.45
RPAIN-204ENST00000405578 KLRF2D3W0D1 207 aa12.23□□□□□ -0.45
RPAIN-204ENST00000405578 CLTBP09497 229 aa12.23□□□□□ -0.45
RPAIN-204ENST00000405578 GOLGA8HP0CJ92 632 aa12.23□□□□□ -0.45
RPAIN-204ENST00000405578 MRPS5P82675 430 aaKnown RBP12.23□□□□□ -0.45
RPAIN-204ENST00000405578 TRAF1Q13077 416 aa12.23□□□□□ -0.45
RPAIN-204ENST00000405578 COL9A3Q14050 684 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-204ENST00000405578 RTN1Q16799 776 aa12.23□□□□□ -0.45
RPAIN-204ENST00000405578 CPLX2Q6PUV4 134 aaKnown RBP12.23□□□□□ -0.45
RPAIN-204ENST00000405578 BTNL9Q6UXG8 535 aa12.23□□□□□ -0.45
RPAIN-204ENST00000405578 ATG4CQ96DT6 458 aa12.23□□□□□ -0.45
RPAIN-204ENST00000405578 ZNF274Q96GC6 653 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-204ENST00000405578 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
RPAIN-204ENST00000405578 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
RPAIN-204ENST00000405578 VWA5AO00534 786 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 CPLX1O14810 134 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 IGHA2P01877 340 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 RAG1P15918 1043 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 SMARCA1P28370 1054 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 COPB2P35606 906 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 SLC16A2P36021 539 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 MCM2P49736 904 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 OAZ1P54368 228 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 EVCP57679 992 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 FPGSQ05932 587 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 TOB2Q14106 344 aaPredicted RBP12.22□□□□□ -0.45
RPAIN-204ENST00000405578 PLS1Q14651 629 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 LRRC41Q15345 812 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 TTBK2Q6IQ55 1244 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 CCDC144CPQ8IYA2 1237 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 NECAB3Q96P71 396 aaPredicted RBP12.22□□□□□ -0.45
RPAIN-204ENST00000405578 PRDM12Q9H4Q4 367 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 MAD2L2Q9UI95 211 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 PRR12Q9ULL5 1215 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 CHD9Q3L8U1 2897 aa12.22□□□□□ -0.45
RPAIN-204ENST00000405578 GREB1LQ9C091 1923 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-204ENST00000405578 SEPT4O43236 478 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 PQBP1O60828 265 aaKnown RBP12.21□□□□□ -0.45
RPAIN-204ENST00000405578 RXRAP19793 462 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 PDIA3P30101 505 aaKnown RBP12.21□□□□□ -0.45
RPAIN-204ENST00000405578 AK2P54819 239 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 CCDC85BQ15834 202 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-204ENST00000405578 C1orf53Q5VUE5 145 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 RASGRP2Q7LDG7 609 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 DPP9Q86TI2 863 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 RAB11FIP4Q86YS3 637 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 STAG2Q8N3U4 1231 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 ZSCAN31Q96LW9 406 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-204ENST00000405578 KIF2CQ99661 725 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 TEX13BQ9BXU2 312 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 UBA5Q9GZZ9 404 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 SLKQ9H2G2 1235 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-204ENST00000405578 SLC38A10Q9HBR0 1119 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 VAT1LQ9HCJ6 419 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 BTBD7Q9P203 1132 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 SEC63Q9UGP8 760 aaKnown RBP12.21□□□□□ -0.45
RPAIN-204ENST00000405578 ADAMTS5Q9UNA0 930 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
RPAIN-204ENST00000405578 MYH8P13535 1937 aa12.21□□□□□ -0.46
RPAIN-204ENST00000405578 COL11A1P12107 1806 aaPredicted RBP12.21□□□□□ -0.46
RPAIN-204ENST00000405578 PARP14Q460N5 1801 aa12.21□□□□□ -0.46
RPAIN-204ENST00000405578 REV3LO60673 3130 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 SYNGAP1Q96PV0 1343 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 ATP2A1O14983 1001 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 KIAA0355O15063 1070 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 CDKL5O76039 1030 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 SLC25A27O95847 323 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 PBX2P40425 430 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 STAT3P40763 770 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 AKAP17AQ02040 695 aaKnown RBP12.2□□□□□ -0.46
RPAIN-204ENST00000405578 OLFML2BQ68BL8 750 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 TMTC3Q6ZXV5 915 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 NOL8Q76FK4 1167 aaKnown RBP12.2□□□□□ -0.46
RPAIN-204ENST00000405578 ADGRF4Q8IZF3 695 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 CPXCR1Q8N123 301 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 RRP36Q96EU6 259 aaKnown RBP12.2□□□□□ -0.46
RPAIN-204ENST00000405578 SPZ1Q9BXG8 430 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 C1QTNF1Q9BXJ1 281 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 SPATC1LQ9H0A9 340 aa12.2□□□□□ -0.46
RPAIN-204ENST00000405578 RANBP17Q9H2T7 1088 aaKnown RBP12.2□□□□□ -0.46
RPAIN-204ENST00000405578 GRXCR1A8MXD5 290 aa12.19□□□□□ -0.46
RPAIN-204ENST00000405578 ICAM1P05362 532 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms