RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 INO80BQ9C086 356 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 AKT3Q9Y243 479 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 ITPK1Q13572 414 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 TRIM14Q14142 442 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 PPP1R7Q15435 360 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 CYP26C1Q6V0L0 522 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 COL23A1Q86Y22 540 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 ATRIPQ8WXE1 791 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 BLZF1Q9H2G9 400 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 OSBPL3Q9H4L5 887 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 SPP2Q13103 211 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 NSRP1Q9H0G5 558 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 REREQ9P2R6 1566 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 UTYO14607 1347 aa12.96□□□□□ -0.33
RAPGEF3-204ENST00000405493 PFKFB2O60825 505 aa12.96□□□□□ -0.34
RAPGEF3-204ENST00000405493 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.34
RAPGEF3-204ENST00000405493 HHIPL2Q6UWX4 724 aa12.96□□□□□ -0.34
RAPGEF3-204ENST00000405493 OTUD6BQ8N6M0 293 aa12.96□□□□□ -0.34
RAPGEF3-204ENST00000405493 VPS33BQ9H267 617 aa12.96□□□□□ -0.34
RAPGEF3-204ENST00000405493 MRPS9P82933 396 aaKnown RBP12.96□□□□□ -0.34
RAPGEF3-204ENST00000405493 RIPOR2Q9Y4F9 1068 aa12.96□□□□□ -0.34
RAPGEF3-204ENST00000405493 NUB1Q9Y5A7 615 aa12.96□□□□□ -0.34
RAPGEF3-204ENST00000405493 PNMA6FA0A0J9YX94 578 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 N4BP1O75113 896 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 ASIC2Q16515 512 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 RIOK1Q9BRS2 568 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 STMN4Q9H169 189 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 MAGEF1Q9HAY2 307 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 PIH1D3Q9NQM4 214 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 ADARB2Q9NS39 739 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 ABCB11O95342 1321 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 ATP2A1O14983 1001 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 FERP16591 822 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 PNOCQ13519 176 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 CCDC25Q86WR0 208 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 SH3RF3Q8TEJ3 882 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 NSMCE1Q8WV22 266 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 TNNI1P19237 187 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 RNASELQ05823 741 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 TUBB2AQ13885 445 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 CDC37Q16543 378 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 NOSTRINQ8IVI9 506 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 LRRIQ1Q96JM4 1722 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 TNNC1P63316 161 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 RCSD1Q6JBY9 416 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 KIAA1841Q6NSI8 718 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 ANKRD13AQ8IZ07 590 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 PRPF38AQ8NAV1 312 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 MAK16Q9BXY0 300 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 TAB2Q9NYJ8 693 aa12.95□□□□□ -0.34
RAPGEF3-204ENST00000405493 CELF2O95319 508 aaKnown RBP12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 BCRP11274 1271 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 ERCC3P19447 782 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 TNFAIP3P21580 790 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 RAD51AP2Q09MP3 1159 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 AP3B2Q13367 1082 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 TTLL4Q14679 1199 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 KCNV1Q6PIU1 500 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 GPBP1Q86WP2 473 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 METTL23Q86XA0 190 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 GPIHBP1Q8IV16 184 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 MLKLQ8NB16 471 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 FAM76AQ8TAV0 307 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 NELFBQ8WX92 580 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 MMP19Q99542 508 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 LRRIQ4A6NIV6 560 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 NSUN6Q8TEA1 469 aaKnown RBP12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 SREK1Q8WXA9 508 aaKnown RBP12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 GGA3Q9NZ52 723 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 CD2BP2O95400 341 aaKnown RBP12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 RASA3Q14644 834 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 INF2Q27J81 1249 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 TKFCQ3LXA3 575 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 STAMQ92783 540 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 MAP4K1Q92918 833 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 MYL3P08590 195 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 PRDX5P30044 214 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 CCDC63Q8NA47 563 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 JAKMIP2Q96AA8 810 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 PCDHA4Q9UN74 947 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 KRT9P35527 623 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 SCARF1Q14162 830 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 NEDD9Q14511 834 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 LONRF3Q496Y0 759 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 CCDC14Q49A88 953 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 GABPB2Q8TAK5 448 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 KIAA1524Q8TCG1 905 aa12.94□□□□□ -0.34
RAPGEF3-204ENST00000405493 DNAJC21Q5F1R6 531 aaKnown RBP12.93□□□□□ -0.34
RAPGEF3-204ENST00000405493 LPAR1Q92633 364 aa12.93□□□□□ -0.34
RAPGEF3-204ENST00000405493 FAM84BQ96KN1 310 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF3-204ENST00000405493 NAPGQ99747 312 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF3-204ENST00000405493 TPCN1Q9ULQ1 816 aa12.93□□□□□ -0.34
RAPGEF3-204ENST00000405493 ARHGAP6O43182 974 aa12.93□□□□□ -0.34
RAPGEF3-204ENST00000405493 ALDH1A1P00352 501 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms