RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 OPLAHO14841 1288 aa25.15■■□□□ 1.62
EPCAM-202ENST00000405271 TAL1P17542 331 aaPredicted RBP25.15■■□□□ 1.62
EPCAM-202ENST00000405271 STAT3P40763 770 aa25.15■■□□□ 1.62
EPCAM-202ENST00000405271 CLK2P49760 499 aaKnown RBP25.15■■□□□ 1.62
EPCAM-202ENST00000405271 KRT25Q7Z3Z0 450 aa25.15■■□□□ 1.62
EPCAM-202ENST00000405271 MAF1Q9H063 256 aa25.15■■□□□ 1.62
EPCAM-202ENST00000405271 PCDHA6Q9UN73 950 aa25.15■■□□□ 1.62
EPCAM-202ENST00000405271 PCDHA8Q9Y5H6 950 aa25.15■■□□□ 1.62
EPCAM-202ENST00000405271 COPB2P35606 906 aa25.14■■□□□ 1.62
EPCAM-202ENST00000405271 GCLCP48506 637 aaPredicted RBP25.14■■□□□ 1.62
EPCAM-202ENST00000405271 GHRHRQ02643 423 aa25.14■■□□□ 1.62
EPCAM-202ENST00000405271 AP3B2Q13367 1082 aa25.14■■□□□ 1.62
EPCAM-202ENST00000405271 MYSM1Q5VVJ2 828 aa25.14■■□□□ 1.62
EPCAM-202ENST00000405271 MCF2L2Q86YR7 1114 aa25.14■■□□□ 1.62
EPCAM-202ENST00000405271 ERO1AQ96HE7 468 aa25.14■■□□□ 1.62
EPCAM-202ENST00000405271 GBP4Q96PP9 640 aa25.14■■□□□ 1.62
EPCAM-202ENST00000405271 BTBD7Q9P203 1132 aa25.14■■□□□ 1.62
EPCAM-202ENST00000405271 CCDC194A0A1B0GVG4 234 aa25.13■■□□□ 1.61
EPCAM-202ENST00000405271 CAP1Q01518 475 aa25.13■■□□□ 1.61
EPCAM-202ENST00000405271 ATL3Q6DD88 541 aa25.13■■□□□ 1.61
EPCAM-202ENST00000405271 POTEEQ6S8J3 1075 aa25.13■■□□□ 1.61
EPCAM-202ENST00000405271 RIOX2Q8IUF8 465 aa25.13■■□□□ 1.61
EPCAM-202ENST00000405271 CD99L2Q8TCZ2 262 aa25.13■■□□□ 1.61
EPCAM-202ENST00000405271 TRERF1Q96PN7 1200 aa25.13■■□□□ 1.61
EPCAM-202ENST00000405271 PAGR1Q9BTK6 254 aa25.13■■□□□ 1.61
EPCAM-202ENST00000405271 SPATC1LQ9H0A9 340 aa25.13■■□□□ 1.61
EPCAM-202ENST00000405271 RNF146Q9NTX7 359 aa25.13■■□□□ 1.61
EPCAM-202ENST00000405271 MAP3K20Q9NYL2 800 aaKnown RBP25.13■■□□□ 1.61
EPCAM-202ENST00000405271 ADAMTS3O15072 1205 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 CNMDO75829 334 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 CYP2C8P10632 490 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 PLS1Q14651 629 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 RILPL1Q5EBL4 403 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 RASGRP4Q8TDF6 673 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 CLEC4DQ8WXI8 215 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 ZNF396Q96N95 335 aaPredicted RBP25.12■■□□□ 1.61
EPCAM-202ENST00000405271 NOL7Q9UMY1 257 aaKnown RBP25.12■■□□□ 1.61
EPCAM-202ENST00000405271 ZNF236Q9UL36 1845 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 HTTP42858 3142 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 CCDC85CA6NKD9 419 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 MEIS2O14770 477 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 UBE2SQ16763 222 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 C17orf99Q6UX52 265 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 PIK3AP1Q6ZUJ8 805 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 OTOP1Q7RTM1 612 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 CHST13Q8NET6 341 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 ACAD9Q9H845 621 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 RBPJLQ9UBG7 517 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 BIN2Q9UBW5 565 aaPredicted RBP25.12■■□□□ 1.61
EPCAM-202ENST00000405271 TRIM17Q9Y577 477 aa25.12■■□□□ 1.61
EPCAM-202ENST00000405271 GCOM1H8Y6P7 765 aaPredicted RBP25.11■■□□□ 1.61
EPCAM-202ENST00000405271 SLC25A27O95847 323 aa25.11■■□□□ 1.61
EPCAM-202ENST00000405271 FOSP01100 380 aaPredicted RBP25.11■■□□□ 1.61
EPCAM-202ENST00000405271 POLR2MP0CAP2 368 aa25.11■■□□□ 1.61
EPCAM-202ENST00000405271 TRAPPC10P48553 1259 aa25.11■■□□□ 1.61
EPCAM-202ENST00000405271 HSD17B4P51659 736 aa25.11■■□□□ 1.61
EPCAM-202ENST00000405271 KRT85P78386 507 aa25.11■■□□□ 1.61
EPCAM-202ENST00000405271 NONOQ15233 471 aaKnown RBP eCLIP25.11■■□□□ 1.61
EPCAM-202ENST00000405271 FAM173BQ6P4H8 233 aa25.11■■□□□ 1.61
EPCAM-202ENST00000405271 HOMER2Q9NSB8 354 aa25.11■■□□□ 1.61
EPCAM-202ENST00000405271 FBXO40Q9UH90 709 aa25.11■■□□□ 1.61
EPCAM-202ENST00000405271 RIPK3Q9Y572 518 aa25.11■■□□□ 1.61
EPCAM-202ENST00000405271 KIAA1217Q5T5P2 1943 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 LRRC37A2A6NM11 1700 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 NFIBO00712 420 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 BAG4O95429 457 aaKnown RBP25.1■■□□□ 1.61
EPCAM-202ENST00000405271 CFBP00751 764 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 ERVK-9P63128 1117 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 ERVK-24P63145 666 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 DNM1Q05193 864 aaKnown RBP25.1■■□□□ 1.61
EPCAM-202ENST00000405271 MUM1L1Q5H9M0 696 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 JAKMIP3Q5VZ66 844 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 USP17L6PQ6QN14 398 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 TXNRD2Q9NNW7 524 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 MORF4L1Q9UBU8 362 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 CPA4Q9UI42 421 aa25.1■■□□□ 1.61
EPCAM-202ENST00000405271 ADGRA2Q96PE1 1338 aa25.09■■□□□ 1.61
EPCAM-202ENST00000405271 FOXD4L6Q3SYB3 417 aaPredicted RBP25.09■■□□□ 1.61
EPCAM-202ENST00000405271 EARS2Q5JPH6 523 aaKnown RBP25.09■■□□□ 1.61
EPCAM-202ENST00000405271 FBXO46Q6PJ61 603 aaPredicted RBP25.09■■□□□ 1.61
EPCAM-202ENST00000405271 FOXD4L3Q6VB84 417 aaPredicted RBP25.09■■□□□ 1.61
EPCAM-202ENST00000405271 EFCC1Q9HA90 598 aa25.09■■□□□ 1.61
EPCAM-202ENST00000405271 TMEM260Q9NX78 707 aa25.09■■□□□ 1.61
EPCAM-202ENST00000405271 CFAP45Q9UL16 551 aa25.09■■□□□ 1.61
EPCAM-202ENST00000405271 FAM205CA6NFA0 338 aa25.08■■□□□ 1.61
EPCAM-202ENST00000405271 SPDYE3A6NKU9 549 aa25.08■■□□□ 1.61
EPCAM-202ENST00000405271 CCNA1P78396 465 aa25.08■■□□□ 1.61
EPCAM-202ENST00000405271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.08■■□□□ 1.61
EPCAM-202ENST00000405271 SHCBP1Q8NEM2 672 aa25.08■■□□□ 1.61
EPCAM-202ENST00000405271 MOV10L1Q9BXT6 1211 aaKnown RBP25.08■■□□□ 1.61
EPCAM-202ENST00000405271 ANO3Q9BYT9 981 aa25.08■■□□□ 1.61
EPCAM-202ENST00000405271 CENPFP49454 3210 aa25.08■■□□□ 1.61
EPCAM-202ENST00000405271 LACTBP83111 547 aaPredicted RBP25.07■■□□□ 1.6
EPCAM-202ENST00000405271 FAM110CQ1W6H9 321 aa25.07■■□□□ 1.6
EPCAM-202ENST00000405271 EHMT1Q9H9B1 1298 aa25.07■■□□□ 1.6
EPCAM-202ENST00000405271 RNF207Q6ZRF8 634 aa25.07■■□□□ 1.6
EPCAM-202ENST00000405271 GPRC5AQ8NFJ5 357 aa25.07■■□□□ 1.6
EPCAM-202ENST00000405271 POLR3EQ9NVU0 708 aa25.07■■□□□ 1.6
EPCAM-202ENST00000405271 PFASO15067 1338 aa25.06■■□□□ 1.6
EPCAM-202ENST00000405271 NCLP19338 710 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms