RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DACT1Q9NYF0 836 aa23.94■■□□□ 1.42
TPM1-208ENST00000404484 PDHXO00330 501 aa23.93■■□□□ 1.42
TPM1-208ENST00000404484 NUP62CLQ9H1M0 184 aa23.93■■□□□ 1.42
TPM1-208ENST00000404484 PSTPIP2Q9H939 334 aa23.93■■□□□ 1.42
TPM1-208ENST00000404484 PTPREP23469 700 aa23.92■■□□□ 1.42
TPM1-208ENST00000404484 ORC2Q13416 577 aaPredicted RBP23.92■■□□□ 1.42
TPM1-208ENST00000404484 GADL1Q6ZQY3 521 aa23.92■■□□□ 1.42
TPM1-208ENST00000404484 FERMT2Q96AC1 680 aa23.92■■□□□ 1.42
TPM1-208ENST00000404484 RANBP17Q9H2T7 1088 aaKnown RBP23.92■■□□□ 1.42
TPM1-208ENST00000404484 SRPRBQ9Y5M8 271 aaKnown RBP23.92■■□□□ 1.42
TPM1-208ENST00000404484 C19orf81C9J6K1 198 aa23.91■■□□□ 1.42
TPM1-208ENST00000404484 BACE1P56817 501 aa23.91■■□□□ 1.42
TPM1-208ENST00000404484 MTMR2Q13614 643 aa23.91■■□□□ 1.42
TPM1-208ENST00000404484 ZNF579Q8NAF0 562 aaKnown RBP23.91■■□□□ 1.42
TPM1-208ENST00000404484 ADAMTS3O15072 1205 aa23.91■■□□□ 1.42
TPM1-208ENST00000404484 KINO60870 393 aaKnown RBP23.91■■□□□ 1.42
TPM1-208ENST00000404484 FKTNO75072 461 aa23.91■■□□□ 1.42
TPM1-208ENST00000404484 HMGCS2P54868 508 aa23.91■■□□□ 1.42
TPM1-208ENST00000404484 DGKZQ13574 1117 aa23.91■■□□□ 1.42
TPM1-208ENST00000404484 KIFC2Q96AC6 838 aa23.91■■□□□ 1.42
TPM1-208ENST00000404484 CLSTN2Q9H4D0 955 aa23.91■■□□□ 1.42
TPM1-208ENST00000404484 FBXO2Q9UK22 296 aaPredicted RBP23.91■■□□□ 1.42
TPM1-208ENST00000404484 NR1I2O75469 434 aa23.9■■□□□ 1.42
TPM1-208ENST00000404484 ATP2C1P98194 919 aaPredicted RBP23.9■■□□□ 1.42
TPM1-208ENST00000404484 ZNF174Q15697 407 aa23.9■■□□□ 1.42
TPM1-208ENST00000404484 INF2Q27J81 1249 aa23.9■■□□□ 1.42
TPM1-208ENST00000404484 PRPF38AQ8NAV1 312 aaKnown RBP23.9■■□□□ 1.42
TPM1-208ENST00000404484 C12orf42Q96LP6 360 aa23.9■■□□□ 1.42
TPM1-208ENST00000404484 SLF1Q9BQI6 1058 aa23.9■■□□□ 1.42
TPM1-208ENST00000404484 BIN2Q9UBW5 565 aaPredicted RBP23.9■■□□□ 1.42
TPM1-208ENST00000404484 PNMA2Q9UL42 364 aa23.9■■□□□ 1.42
TPM1-208ENST00000404484 SYCE3A1L190 88 aa23.89■■□□□ 1.41
TPM1-208ENST00000404484 LAD1O00515 517 aa23.89■■□□□ 1.41
TPM1-208ENST00000404484 CTAGE5O15320 804 aa23.89■■□□□ 1.41
TPM1-208ENST00000404484 TLR2O60603 784 aa23.89■■□□□ 1.41
TPM1-208ENST00000404484 SH3D19Q5HYK7 790 aa23.89■■□□□ 1.41
TPM1-208ENST00000404484 JAKMIP3Q5VZ66 844 aa23.89■■□□□ 1.41
TPM1-208ENST00000404484 RESP18Q5W5W9 173 aa23.89■■□□□ 1.41
TPM1-208ENST00000404484 NEK8Q86SG6 692 aa23.89■■□□□ 1.41
TPM1-208ENST00000404484 TNMDQ9H2S6 317 aa23.89■■□□□ 1.41
TPM1-208ENST00000404484 GOLPH3LQ9H4A5 285 aa23.89■■□□□ 1.41
TPM1-208ENST00000404484 PTPRFP10586 1907 aa23.88■■□□□ 1.41
TPM1-208ENST00000404484 FAM237AA0A1B0GTK4 181 aa23.88■■□□□ 1.41
TPM1-208ENST00000404484 GOLGA6L3A6NEY3 463 aa23.88■■□□□ 1.41
TPM1-208ENST00000404484 FDX1P10109 184 aa23.88■■□□□ 1.41
TPM1-208ENST00000404484 VCAM1P19320 739 aa23.88■■□□□ 1.41
TPM1-208ENST00000404484 CLK2P49760 499 aaKnown RBP23.88■■□□□ 1.41
TPM1-208ENST00000404484 TREML2Q5T2D2 321 aa23.88■■□□□ 1.41
TPM1-208ENST00000404484 ARL6IP4Q66PJ3 421 aaKnown RBP23.88■■□□□ 1.41
TPM1-208ENST00000404484 LRSAM1Q6UWE0 723 aa23.88■■□□□ 1.41
TPM1-208ENST00000404484 ENGASEQ8NFI3 743 aa23.88■■□□□ 1.41
TPM1-208ENST00000404484 EMILIN3Q9NT22 766 aa23.88■■□□□ 1.41
TPM1-208ENST00000404484 FAM13BQ9NYF5 915 aa23.88■■□□□ 1.41
TPM1-208ENST00000404484 CYP2C8P10632 490 aa23.87■■□□□ 1.41
TPM1-208ENST00000404484 MCM7P33993 719 aa23.87■■□□□ 1.41
TPM1-208ENST00000404484 PTGDRQ13258 359 aa23.87■■□□□ 1.41
TPM1-208ENST00000404484 AP3B2Q13367 1082 aa23.87■■□□□ 1.41
TPM1-208ENST00000404484 FMR1NBQ8N0W7 255 aaPredicted RBP23.87■■□□□ 1.41
TPM1-208ENST00000404484 PROCA1Q8NCQ7 364 aaPredicted RBP23.87■■□□□ 1.41
TPM1-208ENST00000404484 NAP1L4Q99733 375 aaKnown RBP23.87■■□□□ 1.41
TPM1-208ENST00000404484 TANGO6Q9C0B7 1094 aa23.87■■□□□ 1.41
TPM1-208ENST00000404484 AGTPBP1Q9UPW5 1226 aa23.87■■□□□ 1.41
TPM1-208ENST00000404484 A0A1B0GVL5 298 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 SNAP25P60880 206 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 SP3Q02447 781 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 SNW1Q13573 536 aaKnown RBP23.86■■□□□ 1.41
TPM1-208ENST00000404484 USH1GQ495M9 461 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 TBCKQ8TEA7 893 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 TMOD4Q9NZQ9 345 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 SLC45A1Q9Y2W3 748 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 ABCB11O95342 1321 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 FOSP01100 380 aaPredicted RBP23.86■■□□□ 1.41
TPM1-208ENST00000404484 PFKFB1P16118 471 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 NDUFA8P51970 172 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 SHC4Q6S5L8 630 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 CLIC6Q96NY7 704 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 RPAP3Q9H6T3 665 aaPredicted RBP23.86■■□□□ 1.41
TPM1-208ENST00000404484 FBXO28Q9NVF7 368 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 TMEM260Q9NX78 707 aa23.86■■□□□ 1.41
TPM1-208ENST00000404484 MRPL11Q9Y3B7 192 aaKnown RBP23.86■■□□□ 1.41
TPM1-208ENST00000404484 WNT7AO00755 349 aa23.85■■□□□ 1.41
TPM1-208ENST00000404484 CAP1Q01518 475 aa23.85■■□□□ 1.41
TPM1-208ENST00000404484 C17orf99Q6UX52 265 aa23.85■■□□□ 1.41
TPM1-208ENST00000404484 CTU1Q7Z7A3 348 aaKnown RBP23.85■■□□□ 1.41
TPM1-208ENST00000404484 MCOLN1Q9GZU1 580 aa23.85■■□□□ 1.41
TPM1-208ENST00000404484 CPA4Q9UI42 421 aa23.85■■□□□ 1.41
TPM1-208ENST00000404484 HPSEQ9Y251 543 aa23.85■■□□□ 1.41
TPM1-208ENST00000404484 FSD2A1L4K1 749 aa23.84■■□□□ 1.41
TPM1-208ENST00000404484 FLOT1O75955 427 aa23.84■■□□□ 1.41
TPM1-208ENST00000404484 SYKP43405 635 aa23.84■■□□□ 1.41
TPM1-208ENST00000404484 UBE2SQ16763 222 aa23.84■■□□□ 1.41
TPM1-208ENST00000404484 LETM2Q2VYF4 491 aa23.84■■□□□ 1.41
TPM1-208ENST00000404484 L1TD1Q5T7N2 865 aaKnown RBP23.84■■□□□ 1.41
TPM1-208ENST00000404484 CCDC174Q6PII3 467 aa23.84■■□□□ 1.41
TPM1-208ENST00000404484 TIGD1Q96MW7 591 aa23.84■■□□□ 1.41
TPM1-208ENST00000404484 PARK7Q99497 189 aaKnown RBP23.84■■□□□ 1.41
TPM1-208ENST00000404484 PPP1R9AQ9ULJ8 1098 aa23.84■■□□□ 1.41
TPM1-208ENST00000404484 ADGRA2Q96PE1 1338 aa23.84■■□□□ 1.41
TPM1-208ENST00000404484 ICAM1P05362 532 aa23.83■■□□□ 1.41
TPM1-208ENST00000404484 PRPHP41219 470 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms